Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 5e-11 >seq1 Length=5311644 Score = 84.2 bits (92), Expect = 5e-11 Identities = 153/221 (69%), Gaps = 5/221 (2%) Strand=Plus/Plus Query 110665 CGAAGGGTGCTTCAACTGGACTTGTTCCAATG-TTAAGAGTCTTCAACGACACTGCAAAA 110723 |||| ||| || | ||| | || |||||| || || ||||| |||| || ||| Sbjct 5026106 CGAATGGTTACTCCAATGGGATAGTGCCAATGCTTCAG-GTCTTTAACGCTACCGCACGC 5026164 Query 110724 TATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTGG 110780 ||||| |||| || || || | | | || |||||||| || ||| | ||||||||| Sbjct 5026165 TATGTAGATCAGGGCGGCAACAAACGTCCAGGTTCATTTGCAATTTATATAGAACCTTGG 5026224 Query 110781 CATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGA 110840 ||| | || || || || | | || || || |||||||| ||| || |||| | | Sbjct 5026225 CATGCGGACATTTTCGAGATTATCGATCTGCGGAAAAATCATGGAAAAGAGGAACTACGG 5026284 Query 110841 GCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATT 110881 || |||||||| || ||||| ||||| || | || || || Sbjct 5026285 GCTCGTGATTTGTTCTATGCGTTGTGGGTTCCGGACTTGTT 5026325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812328612791