Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2 102 5e-17 >seq2 Length=1585523 Score = 102 bits (112), Expect = 5e-17 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 33540 CACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598 |||||| ||| || || |||||| || ||||| || || || || || || | || | Sbjct 1022618 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 1022559 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658 |||| || ||||| ||||| ||||||||||| || || | || | ||||||||||| Sbjct 1022558 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCT 1022499 Query 33659 CAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 ||| || || | |||| ||| | ||||| || || || |||| |||||||| Sbjct 1022498 GAATCTT-TGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGAGTGATCGTC 1022440 Query 33718 TTACCTGTTAACGTT-TTTACAAAGATCTGCA 33748 || || || || ||| || ||||||||||||| Sbjct 1022439 TTTCCGGTCAATGTTCTTCACAAAGATCTGCA 1022408 Score = 98.7 bits (108), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 |||||| || || |||||||| || || ||||| | || ||||| || || || ||||| Sbjct 171878 CTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAA 171937 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||| | ||| || || || |||| | |||||| ||||| |||||| || ||||| Sbjct 171938 AATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCCTT-AACAT 171996 Query 33678 AGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 |||| ||||| || || || |||| |||||||| || || || | || || | Sbjct 171997 TGTCAATAGTGTCAGACGACTCAACCTCAAGAGTGATCGTCTTTCCCGTGAGTGTCTTGA 172056 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 172057 CGAAGATCTGCAT 172069 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/213 (70%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 33540 CACCAAA-TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598 |||||| || ||||| ||| || || || |||||||| || || ||||| | || | Sbjct 171631 CACCAAGGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCT 171690 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658 |||| || || || |||||||| | ||| || || || |||| | |||||| ||||| Sbjct 171691 CCAACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCT 171750 Query 33659 CAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 || ||| || | ||| |||| |||||| || || || || | || ||||| Sbjct 171751 GGATCTTCGCCTTTA-CATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTC 171809 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || ||||| | || || || |||||||||||| Sbjct 171810 TTTCCTGTGAGGGTCTTGACGAAGATCTGCATA 171842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703875811520