Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16]
31 sequences; 46,106,741 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 5e-17
>seq2
Length=1585523
Score = 102 bits (112), Expect = 5e-17
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 33540 CACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598
|||||| ||| || || |||||| || ||||| || || || || || || | || |
Sbjct 1022618 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 1022559
Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658
|||| || ||||| ||||| ||||||||||| || || | || | |||||||||||
Sbjct 1022558 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCT 1022499
Query 33659 CAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717
||| || || | |||| ||| | ||||| || || || |||| ||||||||
Sbjct 1022498 GAATCTT-TGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGAGTGATCGTC 1022440
Query 33718 TTACCTGTTAACGTT-TTTACAAAGATCTGCA 33748
|| || || || ||| || |||||||||||||
Sbjct 1022439 TTTCCGGTCAATGTTCTTCACAAAGATCTGCA 1022408
Score = 98.7 bits (108), Expect = 7e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617
|||||| || || |||||||| || || ||||| | || ||||| || || || |||||
Sbjct 171878 CTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAA 171937
Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677
||| | ||| || || || |||| | |||||| ||||| |||||| || |||||
Sbjct 171938 AATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCCTT-AACAT 171996
Query 33678 AGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736
|||| ||||| || || || |||| |||||||| || || || | || || |
Sbjct 171997 TGTCAATAGTGTCAGACGACTCAACCTCAAGAGTGATCGTCTTTCCCGTGAGTGTCTTGA 172056
Query 33737 CAAAGATCTGCAT 33749
| |||||||||||
Sbjct 172057 CGAAGATCTGCAT 172069
Score = 89.7 bits (98), Expect = 3e-13
Identities = 150/213 (70%), Gaps = 3/213 (1%)
Strand=Plus/Plus
Query 33540 CACCAAA-TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598
|||||| || ||||| ||| || || || |||||||| || || ||||| | || |
Sbjct 171631 CACCAAGGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCT 171690
Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658
|||| || || || |||||||| | ||| || || || |||| | |||||| |||||
Sbjct 171691 CCAACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCT 171750
Query 33659 CAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717
|| ||| || | ||| |||| |||||| || || || || | || |||||
Sbjct 171751 GGATCTTCGCCTTTA-CATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTC 171809
Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| ||||| | || || || ||||||||||||
Sbjct 171810 TTTCCTGTGAGGGTCTTGACGAAGATCTGCATA 171842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703875811520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |