Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 118 3e-21 >seq2 Length=1585523 Score = 118 bits (130), Expect = 3e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || ||||||||||||||||| || || ||| ||||| |||| Sbjct 172282 AAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCAGACACGATCGACAAC 172223 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || || ||| |||| |||||| Sbjct 172222 GTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCAACAACGACTAATCTTC 172163 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | ||||||||| | || | | || |||||| | ||||| ||||| Sbjct 172162 GCCGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAACATTCAGAAGGAGTCA 172103 Query 206365 ACTCTTCACCTTGTT 206379 || |||||||||||| Sbjct 172102 ACCCTTCACCTTGTT 172088 Score = 116 bits (128), Expect = 9e-21 Identities = 158/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 206173 CAGATATTT-TGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGA 206231 ||||| ||| || | ||| | || ||||| ||||||||| | ||||| || |||||| Sbjct 1022410 CAGATCTTTGTGAAGAACATTGACCGGAAAGACGATCACTCTTGAAGTCGAGTCTTCTGA 1022469 Query 206232 CACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| |||| || ||| ||||||||| || |||||||| ||| || ||| || Sbjct 1022470 CACTATCGACAATGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAACA 1022529 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | ||||| || |||||||||||||| ||||| | || | | || || ||| | Sbjct 1022530 GCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACGCTTTCTGACTATAACAT 1022589 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389 |||||||||||||| ||||| |||| |||| |||| Sbjct 1022590 TCAGAAAGAGTCTACCCTTCATCTTG--GTGAGTCTTC 1022625 Score = 109 bits (120), Expect = 1e-18 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||||||||| ||||| ||| |||| || || || ||| Sbjct 171838 CAGATCTTCGTCAAGACCCTCACAGGAAAGACGATTACTCTGGAGGTTGAGTCGTCGGAC 171779 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || |||||| ||||| || || || ||||| ||| ||| ||| ||| Sbjct 171778 ACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAAGGTATTCCGCCTGACCAACAA 171719 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || || || ||||||||||| ||||| | || | | |||||||| | Sbjct 171718 CGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCTGATTACAATATT 171659 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| ||||| ||||||||||||| Sbjct 171658 CAGAAGGAGTCGACTCTTCACCTTG 171634 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| ||||| ||||||||| | || || || |||||| Sbjct 172066 CAGATCTTCGTCAAGACACTCACGGGAAAGACGATCACTCTTGAGGTTGAGTCGTCTGAC 172007 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || || || || ||||| ||| ||| ||| ||| Sbjct 172006 ACTATTGACAATGTTAAGGCGAAAATCCAGGACAAGGAAGGTATTCCGCCTGACCAACAA 171947 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || || || ||||||||||| ||||| | || | | |||||||| | Sbjct 171946 CGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCTGATTACAATATT 171887 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||||| || || |||||||| | | |||||| Sbjct 171886 CAGAAAGAGTCAACCCTCCACCTTGTCCTTCGTCTTCGA 171848 Score = 93.3 bits (102), Expect = 1e-13 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 |||||||||||| || ||||| ||||| | || ||||||| | || | ||||||||| Sbjct 172088 AACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTC 172147 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||| ||||||||||| || ||||||||| Sbjct 172148 GAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGA 172181 Score = 91.5 bits (100), Expect = 3e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 |||||| |||||||| || ||||| |||| |||||| || | | ||| | |||||||| Sbjct 1022390 AACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATCTTC 1022331 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||||||| || |||||||| |||||||| Sbjct 1022330 TAGCTGCTTTCCAGCAAAGATAAGACGTTGTTG 1022298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820330595551