Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=1585523 Score = 107 bits (118), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 || || || || || || || |||||||| ||||| || || || || || | | Sbjct 1022613 AGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAAC 1022554 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || ||||| ||||||||||| || ||||| || ||||||||||| || ||||| Sbjct 1022553 TGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATC 1022494 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 ||| ||||| ||| | ||||| || || || || || ||||| || || || ||| Sbjct 1022493 TTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGAGTGATCGTCTTTCCG 1022434 Query 134688 GTTAAAGTT-TTAACGAAAATTTGCA 134712 || || ||| || || || || |||| Sbjct 1022433 GTCAATGTTCTTCACAAAGATCTGCA 1022408 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | || ||||| || || || ||||| |||||||||||||| | Sbjct 172071 CCTCCACGTAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAA 172130 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| || || || | || || |||||||| || Sbjct 172131 AGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAGGA 172190 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | ||||| || || || || Sbjct 172191 ATGCCCTCCTTATCCTGTATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACC 172250 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || ||||| || || | || ||||| || |||||||| Sbjct 172251 TCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACAAAGATTTGCAT 172297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398204158120