Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq9 190 2e-43 seq23 159 3e-34 seq31 147 2e-30 >seq9 Length=652519 Score = 190 bits (210), Expect = 2e-43 Identities = 388/569 (68%), Gaps = 13/569 (2%) Strand=Plus/Minus Query 4542 AATAA-ACACGCAAAATCACAATGCAAACCTTCGTCTCTG-CTAATCAGTTCGTTAGAAA 4599 ||||| ||| ||||| ||| ||||| ||||| || | | || || ||||| || || | Sbjct 464848 AATAAGACATGCAAATTCAGTATGCATTCCTTCATCGCCGGCTGATGAGTTCATTTGAGA 464789 Query 4600 ACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAG 4659 |||| || || ||||| || |||| ||| || | ||||||||| |||||| ||| ||| Sbjct 464788 ACGTCAAACCCGGCATCAACCCTCGCTTCTTCATCCAAAATATGCAGGCAAACGACGCAG 464729 Query 4660 AAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTT 4719 |||| ||||||||||| | || ||||| ||||| || || | || | | | Sbjct 464728 AAAAAAATATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGCAAATGTGAATCTAT 464669 Query 4720 TGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779 | |||| |||||||| | ||||| || |||||| | |||| ||||||||| || | | Sbjct 464668 TATCTTGAATCCATTGAAGCGCCCATTTTGCTTTTCTTTTAATGCACGGAATAGTTTCAA 464609 Query 4780 TAGCGTTAAATAATTT---ACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTA 4836 ||| ||| ||||| | || | | | | ||| ||||||| || | || || | Sbjct 464608 TAGAGTTGAATAACATCGAACGCTCTGGA---GCATCTCGAATATAGGTTTGAATAAGCA 464552 Query 4837 GGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAG 4896 || |||||||||| |||||||| || |||||| || || || || || | | Sbjct 464551 AAGAGTAGGTTTCAGAATGAATATTTTCCATCATAATCTGGAAACCATAGAAACACCGTG 464492 Query 4897 CTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAG-TTTTCGTTTACTATACCG 4955 | || | || || | |||||| |||| | | | | || || |||||||| ||||| Sbjct 464491 CCTCCGGCACCTGTATTTCGTTGGAAAA-ATGGCGAATGAGATTCTCGTTTACAATACCA 464433 Query 4956 TCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT 5015 || || ||||| ||||| | || |||| | ||| | | ||| | | || ||| Sbjct 464432 TCCGACGCAGCAAAGAACGCGAGGACGCGAGACAGGAAGAATTTTTCATTAACGTTCAGT 464373 Query 5016 ---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGAC 5072 || ||||||| || | ||| | | | ||||| ||||| ||||| || ||| Sbjct 464372 TTGTTGTTCCAGTCGGTGATATCACTTGAAAGATCAATCTCTTCCGATGTCCAGAATGAC 464313 Query 5073 GCTTCCGCTTTTTTGTACATAGACCAAAT 5101 | | |||||||||||||| |||||||| Sbjct 464312 GACTGAGCTTTTTTGTACATTGACCAAAT 464284 Score = 96.9 bits (106), Expect = 3e-15 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 ||||||||||| ||||| || ||||| |||||||| ||||| || || | || || | Sbjct 465187 TTTTGGTATTCCGATACCCGTTTTTCAAAGAAATTGGTTTTACCATCCACAGAGATCATA 465128 Query 4317 TCCATAAAATCAAACGGATTAGTTG--CGTTGTAATGTTTTTCACACTTTAGAGCTACAA 4374 ||||| || ||||| ||||| ||| |||||| |||| ||||| ||| | | | Sbjct 465127 TCCATGAACTCAAAAGGATT--TTGACTGTTGTAGATTTTTCCACACCCTAGCATTGCCA 465070 Query 4375 GCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA 4434 ||||| | || || |||||||| || || | || ||| | || | || || ||||||| Sbjct 465069 GCAATTGATCGGCAACAAATTCGATGTAGTTGCACATCAATTTTGAATTCATCCCAATTA 465010 Query 4435 ATCT 4438 | || Sbjct 465009 ACCT 465006 >seq23 Length=3600692 Score = 159 bits (176), Expect = 3e-34 Identities = 371/553 (67%), Gaps = 11/553 (2%) Strand=Plus/Plus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 |||||| ||||| ||| |||||||| |||| ||| || || ||||| ||| | |||| Sbjct 3498578 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 3498637 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 || ||||| | || | ||| || | ||| || || | || || ||||||||||| || Sbjct 3498638 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 3498697 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT 4726 || || || || || || || || || |||| | || | ||| |||||| Sbjct 3498698 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTGCTTCGTTTGTCAGA 3498757 Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT 4786 |||||||| | ||||||| ||||| ||| | |||||| ||||| | ||| |||| Sbjct 3498758 TATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGTC 3498817 Query 4787 AAATA-ATTTAC---TTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842 || | || | | || || | || |||| | || || || || || || | Sbjct 3498818 GAAGAGATATGCGCGTTGATTAAGAT---CCTTG-ACGTATGTATCGATAAGCAGAGAGT 3498873 Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902 | |||||||||| | ||||| || || || || || |||||| | | || || | Sbjct 3498874 AAGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAG 3498933 Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962 | |||| |||||||| |||| | || | | |||||||| || ||||||||| || Sbjct 3498934 CTGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGG 3498993 Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCA-GGCTTAA--GTTTTT 5019 | ||||| || || | || || | || || | | |||||| | |||| | | | Sbjct 3498994 CGGCAAAGAATGCAAGGACGTGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGT 3499053 Query 5020 TCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCG 5079 |||||| | | ||| | ||| | |||| ||||| ||||| ||||| ||||| | Sbjct 3499054 TCCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTG 3499113 Query 5080 CTTTTTTGTACAT 5092 |||| |||||||| Sbjct 3499114 CTTTCTTGTACAT 3499126 >seq31 Length=1678028 Score = 147 bits (162), Expect = 2e-30 Identities = 356/534 (67%), Gaps = 9/534 (2%) Strand=Plus/Plus Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 |||| |||||||| | || || |||||||| ||||| || || || |||| ||| || Sbjct 618631 TGCATTCCTTCGTCACGACTGATAAGTTCGTTTGAAAAGGTCAACCCAGGCAATAATCCA 618690 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCG 4682 | ||||| | ||||||||| || || || || || || || || ||||| | ||| Sbjct 618691 CGTTTTTTGATCCAAAATATGCACGCGAAAGATCCGGAGAAAAAAATTCCTTCGATGGCT 618750 Query 4683 GCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGC 4741 | || || || | ||| | | || | | || | | ||||| |||||| ||| ||| Sbjct 618751 GAGAATGCAACGAGTCGTTCCGCAAAAGTAACTTGATC-GTCTTCGATCCATCTTAGTGC 618809 Query 4742 CCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTT 4801 ||| ||||||| |||| ||| ||||| || | |||| | || || | Sbjct 618810 CCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGAACTGAACAAGAATGATCG 618869 Query 4802 TTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATT 4861 ||| ||||| ||||| ||||| || | || || | ||| |||| ||||| || || Sbjct 618870 TTCGAATGGATCTTGGATATACGTTTGAATCAGCAAAGAATAAGTTTCTGAATGGATGTT 618929 Query 4862 TTCTATAGCAAT--CTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTA 4919 ||| || || | ||| ||||| || ||| ||| ||| || | || |||| ||| || Sbjct 618930 TTCCAT--CATTGACTGGAATCCATAGAAGGATCGAGCCTCAGCGACCTGAATTTCACTA 618987 Query 4920 CAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAA 4979 | || | |||||||||||||| |||||||| || || ||||| || | Sbjct 618988 GAGAAGTGACGGATCAAGTTTTCGTTTACAATACCGTCGGACGCAGCGAAAAATGCTAGC 619047 Query 4980 ACATGAGATATAAAGTACTGTTCGTCAGGCTTAA---GTTTTTTCCAGTGGGGCAAATCT 5036 ||| ||| | || | | |||| | || | | || ||||||| | ||||||| Sbjct 619048 ACACGAGCCGTGAAAAAGCGCTCGTTTGCGTTCATGCGGTTGTTCCAGTCGTGCAAATCG 619107 Query 5037 TTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTAC 5090 || | | || | |||||| |||||| || || || || |||||||||||| Sbjct 619108 TTTGAAAGGTCTATTTCTTCCGTAGTCCAGAAGGAAGCCTCAGCTTTTTTGTAC 619161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049438655323