Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq31 145 1e-29 seq23 145 1e-29 seq9 118 2e-21 seq1 95.1 2e-14 >seq31 Length=1678028 Score = 145 bits (160), Expect = 1e-29 Identities = 369/553 (67%), Gaps = 20/553 (4%) Strand=Plus/Plus Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 |||||||| || || | ||||| || | ||| || | |||||| ||||| || | | Sbjct 618616 CATGCAAAGTCGGTGTGCATTCCTTCGTCACGACTGATAAGTTCGTTTGAAAAGGTCAAC 618675 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749 ||||||| || |||||| ||||||| ||||||||| |||||||||||| || || || Sbjct 618676 CCAGGCAATAATCCACGTTTTTTGATCCAAAATATGCACGCGAAAGATCCGGAGAAAAAA 618735 Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCC----GTAACTGGCATCATTATG 46805 || ||||| | || | |||||| || |||| || | |||||| | ||| | | Sbjct 618736 ATTCCTTCGATGGCTGAGAATGCAACGAGTCGTTCCGCAAAAGTAACTTG-ATCGTCTTC 618794 Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 ||||| ||| | ||||| | || |||| || | ||||| || ||||| |||| | | Sbjct 618795 GATCCATCTTAGTGCCCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGAACT 618854 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGACTATAC 46923 || | || | ||| ||||| | ||| || | || | ||||| ||| Sbjct 618855 GAACAAGAATGATCGTTCGAATGGATCTTGGATATACGTTTGAATCAGCAAAGA--ATAA 618912 Query 46924 ATTTCTGAATGAATGTTTTCAATAGCCAT---CTGAAATCCGTAAAAACATCTTGCTTCA 46980 |||||||||| |||||||| || ||| ||| ||||| || || ||| || ||| Sbjct 618913 GTTTCTGAATGGATGTTTTCCAT---CATTGACTGGAATCCATAGAAGGATCGAGCCTCA 618969 Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTCAGA-CAAATTCTCATTCACTATTCCATCACT 47039 | | ||| | || || | || | | || ||| || || || || || || || Sbjct 618970 GCGACCTGAATTTCACTAGAGAAGTG-ACGGATCAAGTTTTCGTTTACAATACCGTCGGA 619028 Query 47040 AGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCAT---CGGTAGTCAGTTT 47096 ||||| |||||||| | ||| | | ||| | || | || | | | || Sbjct 619029 CGCAGCGAAAAATGCTAGCACACGAGCCGTGAAAAAGCGCTCGTTTGCGTTCATGCGGTT 619088 Query 47097 ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTC 47156 |||||||| | | ||| ||||| | |||| |||||| | |||||||| || ||||| Sbjct 619089 GTTCCAGTCGTGCAAATCGTTTGAAAGGTCTATTTCTTCCGTAGTCCAGAAGGAAGCCTC 619148 Query 47157 TGCTTTTTTATAC 47169 |||||||| ||| Sbjct 619149 AGCTTTTTTGTAC 619161 Score = 87.8 bits (96), Expect = 3e-12 Identities = 172/249 (69%), Gaps = 8/249 (3%) Strand=Plus/Plus Query 75883 CCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATT--CCGTTG 75940 ||||||||| |||| | || |||| |||| ||||| |||||| ||| |||| | Sbjct 580580 CCAATCCCAGCGATCAGTAGGGCAAACACCCCACAGATCAAATTGTA--ATTGACCGTGG 580637 Query 75941 CTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCA-GCTAGTTCGCAACT 75999 |||| || ||||| | | ||||| | ||| | ||||| || | |||||||| Sbjct 580638 TGAGCAGGAGAGCCATTCCAAGACTCGTATGGACCG-CATTTTCTCGCGATTTCGCAACG 580696 Query 76000 CGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTC 76059 |||| | | ||||||| |||||| |||||||| |||| | || || | || ||||| Sbjct 580697 CGCCAC--AGGCACCGTGATAAATCGTTTCGAATATCTGGATGTTTAGCTGTTTTGCTTC 580754 Query 76060 AAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAAT 76119 || ||| || || | ||| | ||||| |||| || || || || || ||||| Sbjct 580755 AACCGAATCGAATGGCATCTTTAACACCATAAAGACATCGGCAAGACCTTGCACACCAAT 580814 Query 76120 ACCAATAGG 76128 |||||| || Sbjct 580815 ACCAATGGG 580823 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 46344 GTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCAT 46403 |||||| ||| || || || |||||||| ||||| ||||||| ||||| | ||||| Sbjct 618276 GTATTCGGATACTCGCTTTTCAAAAAAATTTGTTTTTCCTTCCAGAGATATCATGTCCAT 618335 Query 46404 AAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCT 46463 |||||||| || || | || || || | ||| || || | | | || ||||| Sbjct 618336 GAAATCAAAAGGGTTTCTGACGTTGTATAATTTGTTGTTCCCAAGTGCATTAAGCAGTCC 618395 Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTAT 46514 ||| |||| ||| || || || | ||||| ||| ||||||||||||| Sbjct 618396 ATCCGCAATGAACTCGATGTATATGCACATCAGCTCATAATTCATTCCTAT 618446 >seq23 Length=3600692 Score = 145 bits (160), Expect = 1e-29 Identities = 374/561 (67%), Gaps = 14/561 (2%) Strand=Plus/Plus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||| || ||||| ||| | |||||||||| || || | ||||| ||| | || || Sbjct 3498578 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 3498637 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 |||||||| || || ||||| || | ||| || || | ||||| || |||||||| || Sbjct 3498638 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 3498697 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---G 46805 || || || ||||| |||||||| || | ||||||| | || || | || || | Sbjct 3498698 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTG-CTTCGTTTGTCAG 3498756 Query 46806 A-ATCCACCTTTGAG--CCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGC 46862 | ||||| |||||| |||| || || || ||| | || || ||||||||||| || Sbjct 3498757 ATATCCA--TTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGC 3498814 Query 46863 ATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATA 46922 | |||||| | || || | ||| || || |||||||| || | ||| || Sbjct 3498815 GTCGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTA 3498874 Query 46923 CATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 46982 |||| ||||||| |||||| || || || || || ||||| | | || |||| Sbjct 3498875 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 3498934 Query 46983 AATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGC 47042 || || || | |||| || || ||| ||| || ||||| || || ||| || Sbjct 3498935 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 3498994 Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAAT---ATTTTTCATCG-GTAGTCAGTTTAT 47098 ||||| ||||| | || || | || |||| | |||| | || || | | | Sbjct 3498995 GGCAAAGAATGCAAGGACGTGGGTGATGAAATGACGCTCGTCATTGTTTAATC-GCTCGT 3499053 Query 47099 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTG 47158 ||||||| | ||| | | | || | ||||| | |||||||| || || |||| Sbjct 3499054 TCCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTG 3499113 Query 47159 CTTTTTTATACATATTCCATA 47179 |||| || ||||| | ||||| Sbjct 3499114 CTTTCTTGTACATCTGCCATA 3499134 Score = 87.8 bits (96), Expect = 3e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 |||||||| || |||||||||||| |||| ||| |||| | ||| || || || Sbjct 922880 AAGAGATCCGGAATCCATAGAGCATAGAATAAATCACGGGCGCGCACTTCCTCTTTGCCA 922939 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 |||||| | | ||| | | | | | ||||||| |||||| ||||| ||||| || Sbjct 922940 TGATTCTTCCTCAAATCGATCATCGCGAAGATATCAGCATGCCAAGGTTCGAGATAGATA 922999 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | | || || || || ||||| || || || | ||||| ||||| ||| || Sbjct 923000 GCGAAAGCCCCAGGACGCTTGTTACCACCTTGGTCGACATATCGTGCAGTAGCATTGTAC 923059 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTA-CCATTTGTTCCAGAAATATAA 76843 | | | |||||| | ||| || || || ||| ||||| || || | ||| ||| Sbjct 923060 GCCCGAAGCATTGGCACAATACCATTCGA-GTACCCATTCGTGCCGGCAATGTAA 923113 Score = 86.0 bits (94), Expect = 9e-12 Identities = 175/256 (68%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936 ||||| || || || ||| ||| | ||||||| ||||| || || ||||| || Sbjct 923206 CCTATGCCACCGGCTGATTTGCTGATCAAAGCACAGTTTTTCAGGGTATCGTAGATACCT 923265 Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996 || ||| |||||| ||||| || ||| || || ||||||||| | || | | Sbjct 923266 TCGATAGAATCATCTTTCATGCAAACAAGGAAGCATGAGGACATTTGAGGCGAAAGGGGT 923325 Query 76997 -CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTA 77055 || ||||| || | || |||| ||||||||||| || || || | || ||||| Sbjct 923326 ACCGGCATTGAAGAGAGTGGGAGTGGCATGAGTGAAATATCGCTCGGACATGAGGTTGTA 923385 Query 77056 TGTTT-CAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACA 77114 ||||| ||| | ||| || ||||| | || || || |||||||| ||||| | || Sbjct 923386 TGTTTGCAAGACATGC-TCGATATCGTCTCCGTGTATCCCAACAGCGACCCGCATGATCA 923444 Query 77115 TATGCTGAGGTCGTTC 77130 |||| || || || || Sbjct 923445 TATGTTGTGGCCGCTC 923460 >seq9 Length=652519 Score = 118 bits (130), Expect = 2e-21 Identities = 366/557 (66%), Gaps = 21/557 (4%) Strand=Plus/Minus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTA-CTAATTAATTCGTTAGAAAATGTGA 46687 ||||||||| ||| ||| | |||||||| | || || | ||| || || || || | Sbjct 464842 ACATGCAAATTCAGTATGCATTCCTTCATCGCCGGCTGATGAGTTCATTTGAGAACGTCA 464783 Query 46688 GCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGA 46747 || ||||| | || ||||| || | ||||||||| || || || ||||||| | Sbjct 464782 AACCCGGCATCAACCCTCGCTTCTTCATCCAAAATATGCAGGCAAACGACGCAGAAAAAA 464723 Query 46748 ATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTG-GCATC-ATTAT- 46804 |||||||||| | || || ||||| || | | |||| | || || | ||| ||||| Sbjct 464722 ATATGCCTTCGATCGCTGCAAATGCTACCAAACGCTCTGC--AAATGTGAATCTATTATC 464665 Query 46805 --GAATCCACCTTTGA---GCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTAT 46859 ||||||| |||| ||||| | || ||| | || | || || || ||||| || Sbjct 464664 TTGAATCCA---TTGAAGCGCCCATTTTGCTTTTCTTTTAATGCACGGAATAGTTTCAAT 464608 Query 46860 AGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTA--AAAGA 46917 || || || | | || | |||| || ||| || | || | ||||| Sbjct 464607 AGAGTTGAATAACATCGAACGCTCTGGAGCATCTCGAATATAGGTTTGAATAAGCAAAGA 464548 Query 46918 CTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCT 46977 || |||| |||||||| ||||| || ||||| || || || ||||| | ||| Sbjct 464547 GTAGG--TTTCAGAATGAATATTTTCCATCATAATCTGGAAACCATAGAAACACCGTGCC 464490 Query 46978 TCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCA 47037 || | | ||||| || | |||| | | | |||||| || || || ||||| Sbjct 464489 TCCGGCACCTGTATTTCGTTGGAAAAATGGCGAATGAGATTCTCGTTTACAATACCATCC 464430 Query 47038 CTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTA 47097 |||||||| || || | || | | || ||||||||| ||||||| Sbjct 464429 GACGCAGCAAAGAACGCGAGGACGCGAGACAGGAAGAATTTTTCATTAACGTTCAGTTTG 464370 Query 47098 TT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCC 47154 || |||||| ||||||| |||| | ||| | ||||| | |||||||||||||| | Sbjct 464369 TTGTTCCAGTCGGTGATATCACTTGAAAGATCAATCTCTTCCGATGTCCAGAATGACGAC 464310 Query 47155 TCTGCTTTTTTATACAT 47171 | |||||||| ||||| Sbjct 464309 TGAGCTTTTTTGTACAT 464293 >seq1 Length=5311644 Score = 95.1 bits (104), Expect = 2e-14 Identities = 158/225 (70%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| |||| |||||| || | |||| | |||| | ||||| ||||| || |||| Sbjct 5027734 CAACAGTGATCTGAATAGGCCGTGCAGCTGATGTTGTCCTCAGATAATACATCCCGGTTT 5027675 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTC--GGATC 75489 | | ||| |||||||| || |||||||| |||||||| | || || ||| Sbjct 5027674 TCAAGCCCTTTCTCCATCCATAAAAATGCATACTTGTTAGCT--GACCCACAGATGGAGA 5027617 Query 75490 GGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCAT 75549 ||| | ||||||||||| ||||||||| ||| || || || | ||| | || | Sbjct 5027616 GGCAAGATGAATATTCAAGCTCTGACTTTGGCAGATAAACGCGCCACGATCCACGGCAAA 5027557 Query 75550 TTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 75594 | | ||| || ||||||||||||||||||| ||||| |||| Sbjct 5027556 ATCCAAAATCGTTTTTTGAGGAATTTCCCAAACCGTTTTATAAAC 5027512 Score = 86.0 bits (94), Expect = 9e-12 Identities = 188/275 (68%), Gaps = 5/275 (2%) Strand=Plus/Minus Query 76915 TTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 |||||| || ||| | || || || ||| ||| || || || | | |||||| Sbjct 5025968 TTTCAACGTCTCAAATATTCCTTCAATAGAATC-TCTTTCGTGCAGACCAAAAAACATGA 5025910 Query 76975 AGACATTTGATGATGAACA-GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACC 77033 ||||||||| | |||| | || |||||| |||| | || |||| |||||||||||| Sbjct 5025909 CGACATTTGAGG-TGAAGAAGTACCTGCACTAAAAAGGGTTGGAGTTGCATGAGTGAAAT 5025851 Query 77034 ATTTTTCAGAAAGTAGATTGTATGT-TTCAATAACTGCTTCTATATCCCATTGATGAATT 77092 || || || | || ||||| || | ||| | || || ||||| | ||| ||| Sbjct 5025850 ATCGCTCCGACATAAGGTTGTACGTCTGCAACACATG-ATCAATATCATCTCCATGTATT 5025792 Query 77093 CCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTC 77152 || ||||| |||||||| | |||||| || ||||| || ||| | || | | | Sbjct 5025791 CCGACAGCAACACGCATTAGCATATGTTGCGGTCGCTCAACAATACGTCCGTTCAATCTA 5025732 Query 77153 AACAAGTATGATTTTTCCAAAGTTTTAAAACCAAA 77187 | || || ||| |||||| ||||| |||||||| Sbjct 5025731 AGCAGATAAGATCGTTCCAACGTTTTGAAACCAAA 5025697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934123737920