Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001562095.1_202016-02-16] 31 sequences; 46,106,741 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2 132 3e-26 >seq2 Length=1585523 Score = 132 bits (146), Expect = 3e-26 Identities = 159/213 (75%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| ||||||| || |||||| || || |||||||| | || ||| | || | Sbjct 171631 CACCAAGGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCT 171690 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || ||||| || | ||| || || || | || | ||||||||| ||| Sbjct 171691 CCAACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCT 171750 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 |||||| ||| || ||| | |||||||| | || || ||||||| |||||||| Sbjct 171751 GGATCTTCGCCTTTACATTGT--CAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGT 171808 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| ||||||||||| |||||||| ||||| Sbjct 171809 CTTTCCTGTGAGGGTCTTGACGAAGATCTGCAT 171841 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| || |||||||| || | || ||| | || || Sbjct 172089 ACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCG 172148 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | || || ||||| | ||| | || ||||| ||| | Sbjct 172149 AGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTGT 172208 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||| | || || ||||||| || ||||| || Sbjct 172209 ATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTTG 172268 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||| || |||||||||||| Sbjct 172269 CCCGTGAGGGTCTTAACAAAGATTTGCATG 172298 Score = 107 bits (118), Expect = 1e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || ||| || || || |||||||| | || ||| | || ||| Sbjct 171861 ACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCC 171920 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || ||||| || | ||| || || || | || | ||||||||| ||| Sbjct 171921 AACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGG 171980 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 || ||| ||| || ||| | || ||||| | || || ||||| | || ||||||| Sbjct 171981 ATTTTCGCCTTAACATTGT--CAATAGTGTCAGACGACTCAACCTCAAGAGTGATCGTCT 172038 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||| ||||| |||||||| |||||| Sbjct 172039 TTCCCGTGAGTGTCTTGACGAAGATCTGCATG 172070 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 44128 CACCAGG-TGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| | ||||| || ||| || || ||||| || || | || || | || | Sbjct 1022618 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 1022559 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || ||||||||||||||||| || || | ||| | ||||| || ||| Sbjct 1022558 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCT 1022499 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||| || ||| | || ||||| | || || || || | || ||||| Sbjct 1022498 GAATCTTTGCCTTGACATTGT--CGATAGTGTCAGAAGACTCGACTTCAAGAGTGATCGT 1022441 Query 44305 CTTTCCCGT-GAGGGTCTTCACGAAGATTTGCA 44336 |||||| || | | ||||||| ||||| |||| Sbjct 1022440 CTTTCCGGTCAATGTTCTTCACAAAGATCTGCA 1022408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990263991127