Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq47 122 2e-22 >seq47 Length=266373 Score = 122 bits (134), Expect = 2e-22 Identities = 156/210 (74%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 230428 GACGCTATTCCATGTCGCCTT-ATTGGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486 ||||| |||| ||| ||| || ||||||||||| | | ||| | || || ||||| Sbjct 37778 GACGCGCTTCC-TGTAAGCTTGATCGGCATGAACGCGACATTGATGTGTCAATATATCGA 37720 Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAA 230546 ||||| ||||| || | | || || || || || |||| |||||||||| | ||| Sbjct 37719 GTTCGTTGCCGATCGACTACTCGTCGCTCTCGGCAACAAGAAGTTGTACAACTCGACGAA 37660 Query 230547 CCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCG 230606 |||||| | |||||||| | || ||||||||||||||||||||||| || || ||||| Sbjct 37659 CCCCTTCGACTTTATGGACATGATCTCGCTTCAAGGGAAGACCAACTTTTTTGAGAAGCG 37600 Query 230607 TGTCAGTGACTA-TCAGAGGCCTGGTGTGA 230635 || || || ||| ||| ||||||||| Sbjct 37599 GGTGTCCGATTACTCAAAGG-CTGGTGTGA 37571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819459621050