Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq47 248 9e-61 seq48 196 5e-45 seq38 114 1e-20 >seq47 Length=266373 Score = 248 bits (274), Expect = 9e-61 Identities = 401/572 (70%), Gaps = 11/572 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | || ||| |||| | Sbjct 38482 ATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAAGAGATGGATTTA 38423 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || || ||| |||||| | ||| |||| |||| ||| || |||||| Sbjct 38422 TCAAAAGACCTTCATGACTGGAACAACCGCCTGAATGACAGCGAACGATTCTTCATCTCC 38363 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | || || || || || |||||| || ||||| |||||||||||||| |||| || Sbjct 38362 CGTGTTCTCGCGTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAATCTTCTCGAACGC 38303 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | || || ||||| || ||||| || ||||||||||| || ||||| ||| Sbjct 38302 TTCTCGAACGAAGTACAGGTCGCTGAGGCACGTTGCTTCTACGGGTTCCAGATTATGATG 38243 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTC 116928 |||||| | ||||| || | || || ||||||||||| ||| | | | || Sbjct 38242 GAGAACATTCACTCCGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCTGTC 38183 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | | | | ||| || ||| | || |||||||| || || ||| |||| ||||| Sbjct 38182 GAACGTG-ATTTCC--TTTTTG-ATGCTATCGAGACTATTCCTTGCATCAAGCGCAAGGC 38127 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 ||||||||| |||||||||||| | | | | | | ||||||||||| || || || Sbjct 38126 CGAGTGGGCTCTGCGCTGGATCAGTGACGAACACTCGGTTTTCGGCGAGCGTCTCGTAGC 38067 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||| || || || || ||| | ||||| || ||| ||||| |||| |||||| | || Sbjct 38066 CTTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATGAA 38007 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| || || | ||||| ||| || | ||| |||||||||||| | || ||||| Sbjct 38006 GAAGCGTGGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAGGG 37947 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200 | ||||| |||||| ||||| | || |||| Sbjct 37946 TATGCATACCGACTTCGCCTGCCTTCTCTTCA 37915 >seq48 Length=263890 Score = 196 bits (216), Expect = 5e-45 Identities = 385/561 (69%), Gaps = 15/561 (3%) Strand=Plus/Plus Query 116639 TGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCC 116698 |||| |||||||| || || || || |||||||||||| || ||| | ||||| | Sbjct 116259 TGGCAGATGTACAAGAAAGCAGAAGCATCGTTCTGGACCTCGGAAGAGATTGACCTCACT 116318 Query 116699 AAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 | || ||||||| ||||| || ||| | ||||||| |||||||||| ||| Sbjct 116319 CATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCATTTCATCACCCAC 116378 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 || || || || || |||||| ||||| ||||| ||||| |||||| | ||||| || Sbjct 116379 GTCCTTGCATTCTTTGCCGCCTCTGACGGTATCGTGAACGAAAATCTGTTGGAGCGCTTT 116438 Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAG 116875 | | || ||||| | || |||||||| | ||| || || || || || ||||| Sbjct 116439 TCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCAAATAATGATGGAA 116498 Query 116876 AACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCGGAGG 116933 ||||| || || |||| || || || ||||| || ||||| | |||| | Sbjct 116499 AACGTTCATTCTGAAACTTACTCTCTGCTTATCGATACATACGTCAAGGATCTT---AAT 116555 Query 116934 AGAAGCTC-CGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAG 116992 | || | | | || |||| || || || || |||||| |||| || ||||| Sbjct 116556 CAACGCGCATATCTCTTCGACGCAATAGAAACAATACCGTGCATCAAGCGCAAAGCCGAC 116615 Query 116993 TGGGCGCTGCGCTGGATCGCCGGCAGA-GAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTT 117051 ||||| || ||||| | | || | || | | | || | ||| | ||||||| || Sbjct 116616 TGGGCCCTCAAATGGATATCTGACAAACGAAG-CACTTTTGCAGAGAGATTGGTGGCATT 116674 Query 117052 CGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAA 117111 ||| || |||||||| |||| ||||| || ||||| |||| || ||| | ||||| Sbjct 116675 CGCTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCTTCCATTTTCTGGTTAAAGAA 116734 Query 117112 ACGCGGCCTCATGCCCGGCCTGACT--TTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 |||||||| ||||| ||||| ||| |||| |||||||||||| | | || || ||| Sbjct 116735 GCGCGGCCTGATGCCTGGCCTAACTTATTCA--AACGAGCTCATCAGCCGAGATGAAGGT 116792 Query 117170 CTGCATTGCGACTTTGCCTGT 117190 | ||| ||| || || ||| Sbjct 116793 TTACATACCGATTTCGCGTGT 116813 >seq38 Length=308705 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || |||||||||||||| ||||| | || ||||| | | Sbjct 188624 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 188683 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | || || |||||||| || | || || Sbjct 188684 GACACGATCGACAACG-TGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCA 188742 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| |||| ||| ||||| ||||| || || | |||||||| |||||||| Sbjct 188743 ACAACGACTAATCTTCGCCGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAA 188802 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || || || || || Sbjct 188803 CATTCAGAAGGAGTCAACCCTTCACCTTGT 188832 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || || || || | || || || | | Sbjct 189080 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACGATTACTCTGGAGGTTGAGTCGTCG 189139 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| |||||||| || | |||||| Sbjct 189140 GACACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCAG 189199 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | || ||||| ||| |||| || | ||||| || ||| |||||| Sbjct 189200 CAGCGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCCGATTACAAC 189259 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||||| | || || || || Sbjct 189260 ATCCAGAAGGAGTCGACTCTTCACCT 189285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217042519600