Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq5 105 1e-17 >seq5 Length=946259 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| | || || || || || || | ||| | || | Sbjct 884039 AATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTC 883980 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || || || || ||||| || ||||| || ||||| || Sbjct 883979 TGATACCATTGACAATGTGAAGGCAAAGATCCAGGATAAGGAGGGTATCCCTCCTGACCA 883920 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | ||||| ||||| ||||| || |||| ||| | || || | |||||||| Sbjct 883919 ACAACGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAA 883860 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| ||||||||||| ||| | ||| | ||| | ||| | || ||||| || Sbjct 883859 TATCCAAAAAGAATCGACTCTTCATCTTGTTCTCCGTCTTCGTGGTGGGAT 883809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755452836528000