Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq38 116 2e-21 seq5 98.7 6e-16 >seq38 Length=308705 Score = 116 bits (128), Expect = 2e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 34180 CACCA-GGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGT 34238 ||||| |||| | ||| || ||||| |||||||| ||||| ||| || | || | Sbjct 189290 CACCAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCT 189231 Query 34239 CCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGG 34298 ||||||||||||| || |||||||| ||||||||||| || | || ||||||||| Sbjct 189230 CCAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCT 189171 Query 34299 CTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTT 34358 ||||| ||||| || | | || | || | ||| || || |||| || || || | Sbjct 189170 GGATCTTCGCCTTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCT 189111 Query 34359 TGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || ||||| || || || ||||||||||| Sbjct 189110 TTCCTGTGAGGGTCTTGACGAAGATCTGCAT 189080 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || || | || || | ||||||||| ||||| Sbjct 188814 TCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAAG 188755 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || || || || ||| || | || |||||| || |||||| ||| | | | Sbjct 188754 ATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTGTATCTTGGCCTTCACGTTG 188695 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || ||||| |||| ||||| |||||||| ||||| || || ||| Sbjct 188694 TCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACA 188635 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 188634 AAGATTTGCAT 188624 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| || ||||| || || ||| || | || |||||||||||||| || ||| Sbjct 189042 TCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAA 188983 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| || || ||||| || | | |||||||| || || ||| | || | Sbjct 188982 ATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCCTTAACATTG 188923 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | ||| || || || | ||||| || || || ||||| || || || Sbjct 188922 TCAATAGTGTCAGACGACTCAACCTCAAGAGTGATCGTCTTTCCCGTGAGTGTCTTGACG 188863 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 188862 AAGATCTGCAT 188852 >seq5 Length=946259 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| ||||| ||||| || ||| ||| | || ||||||||||| || || || Sbjct 883620 TCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAACTGCTTTCCAGCAAAG 883679 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | ||||| |||||| || | || || ||||| |||||| ||| | || | Sbjct 883680 ATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCCTTGACATTG 883739 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || ||||| || | ||||| || || ||||| | || |||||| Sbjct 883740 TCGATAGTGTCAGAAGACTCGACTTCAAGAGTGATCGTCTTTCCGGTCAATGTCTTCACA 883799 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 883800 AAGATCTGCATC 883811 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 |||||| || || || || || || || ||| | || || | |||||| || || || Sbjct 883847 TTCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAA 883906 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || || || || ||||| || | | |||||| || |||||| ||| | || Sbjct 883907 GATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTATCCTGGATCTTTGCCTTCACATT 883966 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | ||| | ||| ||||| |||| |||||||| || ||||| | ||| || || Sbjct 883967 GTCAATGGTATCAGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGAC 884026 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 884027 AAAGATCTGCAT 884038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070680957600