Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq48 140 3e-28 >seq48 Length=263890 Score = 140 bits (154), Expect = 3e-28 Identities = 294/432 (68%), Gaps = 6/432 (1%) Strand=Plus/Minus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 |||||| ||||| ||| | || ||||||| || || || ||||||||| | |||| Sbjct 116813 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 116754 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322 || ||||||| || || || |||||||| || || | |||||| || || ||||| || Sbjct 116753 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 116694 Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT-TTTGTTCG 14381 |||||||| || ||||| || || | |||| ||| |||| | ||||| ||||| | Sbjct 116693 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAG-TGCTTCGTTTGTCAG 116635 Query 14382 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14441 |||||||||| ||||| || | ||| || || | |||||||| || || | Sbjct 116634 ATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGT 116575 Query 14442 TAAATAAATGTTC-CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATA 14499 || | || | | | | || || | |||| | ||||||||| ||||| | || Sbjct 116574 CGAAGAGATATGCGCGTTGATTAAGATCCTTG--ACGTATGTATCGATAAGCAGAGAGTA 116517 Query 14500 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14559 ||||||| || | ||||||||| ||| || || |||||||| | | || || | Sbjct 116516 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 116457 Query 14560 CCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14619 ||| || || |||| | || || |||||| || || ||||| ||| || Sbjct 116456 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 116397 Query 14620 TGCAAAAAATGC 14631 ||||| ||||| Sbjct 116396 GGCAAAGAATGC 116385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482343580177800