Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq48 147 2e-30 >seq48 Length=263890 Score = 147 bits (162), Expect = 2e-30 Identities = 249/358 (70%), Gaps = 11/358 (3%) Strand=Plus/Minus Query 11629 ACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAA 11688 |||||| ||||| |||||||||||| |||| || || || || || ||| | |||| Sbjct 116813 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 116754 Query 11689 TCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAA 11748 || ||||||| || || || |||| ||| || || | ||| || || |||||||| || Sbjct 116753 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 116694 Query 11749 TATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA--TACCTTG-TTGCTAGA 11805 |||||||| ||||| || ||||| || | ||| ||| || | | | | | ||| ||| Sbjct 116693 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTGCTTCGTTTGTCAGA 116634 Query 11806 TATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTT 11865 ||||||||| |||||| || ||||| || | ||| ||||||||||| |||| Sbjct 116633 TATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGTC 116574 Query 11866 AAATAAAT----GCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTAT 11921 || | || || || | || ||| | || |||||||| || | | | | Sbjct 116573 GAAGAGATATGCGCGTTGAT----TAAGATCCTTGACGTATGTATCGATAAGCAGAGAGT 116518 Query 11922 ACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTC 11979 | |||| ||||||| |||||||| |||||| || ||||| || | || ||||| Sbjct 116517 AAGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTC 116460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468522838052400