Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq48 141 8e-29 >seq48 Length=263890 Score = 141 bits (156), Expect = 8e-29 Identities = 297/442 (67%), Gaps = 8/442 (2%) Strand=Plus/Minus Query 13150 ACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAG 13209 ||| || ||||| || || |||||||||| || || |||||||||||| | ||||| Sbjct 116813 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 116754 Query 13210 ACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaa 13269 || ||||| || || || || || | ||| || || | ||| ||||| || |||||||| Sbjct 116753 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 116694 Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTC 13329 ||||| || || || || || || | ||| || || || | || || ||| Sbjct 116693 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTGCTTCGTTTGTCAGA 116634 Query 13330 TATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTT 13389 |||||| || |||||||| ||||| | || | ||| || |||||||||||| Sbjct 116633 TATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGTC 116574 Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGC----TAT 13445 || | ||| || ||| || | | |||| |||| |||||| | Sbjct 116573 GAAGAGATATGCGCGTTGATTAAGATC----CTTGACGTATGTATCGATAAGCAGAGAGT 116518 Query 13446 ACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTG 13505 | |||| ||||||| ||||||||| ||||||||| |||||||| | | ||||| | Sbjct 116517 AAGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAG 116458 Query 13506 ATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAG 13565 | | || |||||| |||| | || | |||||||| || || |||||| | Sbjct 116457 CTGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGG 116398 Query 13566 CAGCaaaaaaaGCAAGTATGTG 13587 | ||||| || ||||| | ||| Sbjct 116397 CGGCAAAGAATGCAAGGACGTG 116376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430980640379670