Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq17 95.1 6e-15 seq62 93.3 2e-14 seq64 89.7 3e-13 >seq17 Length=493145 Score = 95.1 bits (104), Expect = 6e-15 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 || |||||| || ||||| | | |||||||||| ||||||||||||||||||||| Sbjct 376974 ATCAAAAATATAAGTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACG 377033 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| ||||||||||||| | ||||| Sbjct 377034 ACGCTCTAACCAACTGAGCTAGTCGGCCG 377062 >seq62 Length=211624 Score = 93.3 bits (102), Expect = 2e-14 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||| | |||| ||||| | | |||||||||| |||||||||||||||||||||||| Sbjct 93915 AAAGACCAAAATGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACG 93856 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||||||||| | |||| Sbjct 93855 CTCTAACCAACTGAGCTAGTCGGCC 93831 >seq64 Length=211194 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 144263 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 144322 Query 11528 CCG 11530 ||| Sbjct 144323 CCG 144325 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 130186 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 130245 Query 11528 CC 11529 || Sbjct 130246 CC 130247 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261490132380460