Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq38 89.7 5e-13 seq5 89.7 5e-13 >seq38 Length=308705 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||||||| | ||||| ||||| | ||||||||| Sbjct 189276 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCAACTGCTTGCCA 189217 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || | || | |||||||||||| || || || || || ||||| ||| ||| ||| Sbjct 189216 GCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTT 189157 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | ||||| | || | |||| || || || || || || Sbjct 189156 ACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTTCCTGTGAGGGTC 189097 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 189096 TTGACGAAGATCTGCAT 189080 >seq5 Length=946259 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||||| || ||||| || || ||||| Sbjct 883812 CCACCACGAAGACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAA 883871 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || ||||||||||| || || |||| | ||| || ||||| |||||| Sbjct 883872 AGAGTGCGGCCATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGG 883931 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||| | | || | ||||| | ||||||| Sbjct 883932 ATACCCTCCTTATCCTGGATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCGACC 883991 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| | ||| || || || |||||||| Sbjct 883992 TCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 884038 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 131031 ATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTG 131090 ||| | ||| ||||| || |||||||| || || | || || ||||| | ||| Sbjct 883607 ATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAACTG 883666 Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||| || || |||| |||||||| ||||| ||||| || ||||||||||| ||| | | Sbjct 883667 CTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTC-CTGAATCT 883725 Query 131151 CTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGG 131209 || ||||| | || | ||| || | ||||||| || | || | || || |||| Sbjct 883726 TTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGAGTGATCGTCTTTCCGG 883785 Query 131210 TTAGAGTTTTTACGAAAATCTGCAT 131234 | | || || || || |||||||| Sbjct 883786 TCAATGTCTTCACAAAGATCTGCAT 883810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010823446400