Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq47 214 3e-50 >seq47 Length=266373 Score = 214 bits (236), Expect = 3e-50 Identities = 322/456 (71%), Gaps = 9/456 (2%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || ||||| ||||||||||| ||||| ||||| ||||| || | | ||| | Sbjct 38356 CTCGCGTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAATCTTCTCGAACGCTTCTCG 38297 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || || ||| | |||||| || ||||||||||| |||||||| || |||||| Sbjct 38296 AACGAAGTACAGGTCGCTGAGGCACGTTGCTTCTACGGGTTCCAGATTATGATGGAGAAC 38237 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||| ||| ||| | || || |||| |||||| || || ||||| ||| Sbjct 38236 ATTCACTCCGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCTGTCGAACGT 38177 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 | || || | || || ||||| || || ||||||||| ||||| || ||||| Sbjct 38176 GATTTCCTTTTTGATGCTATCGAGACTATTCCTTGCATCAAGCGCAAGGCCGAGTGGGCT 38117 Query 42663 CTCAACTGGATCGAGAGTCCCG---ACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACC 42719 || ||||||| ||| || || | ||||||||| | || ||||||||| | Sbjct 38116 CTGCGCTGGATC---AGTGACGAACACTCGGTTTTCGGCGAGCGTCTCGTAGCCTTTGCT 38060 Query 42720 GCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAG 42779 || || || ||||| |||||||| ||| ||||||| |||||||| ||| | ||| || Sbjct 38059 GCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATGAAGAAGCGT 38000 Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839 | | ||||| || | | ||||| ||||| |||||||| | || ||||| ||||| Sbjct 37999 GGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAGGGTATGCAT 37940 Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC 42875 | ||||| |||||||| || ||| ||||||||| Sbjct 37939 ACCGACTTCGCCTGCCTTCTCTTC---AGCCACCTC 37907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944335245579600