Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq47 113 1e-19 >seq47 Length=266373 Score = 113 bits (124), Expect = 1e-19 Identities = 143/193 (74%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 243561 GCTT-ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCA 243619 |||| || ||||||||| | | | ||| | || || ||||| ||||| ||||| || Sbjct 37762 GCTTGATCGGCATGAACGCGACATTGATGTGTCAATATATCGAGTTCGTTGCCGATCGAC 37703 Query 243620 TTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGG 243679 | || |||| || || | |||| |||||||||| | ||||||||| | |||||||| Sbjct 37702 TACTCGTCGCTCTCGGCAACAAGAAGTTGTACAACTCGACGAACCCCTTCGACTTTATGG 37643 Query 243680 AGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTA-TCAA 243738 | | || |||||||||||||| || ||||| || || ||||| || ||||| |||| Sbjct 37642 ACATGATCTCGCTTCAAGGGAAGACCAACTTTTTTGAGAAGCGGGTGTCCGATTACTCAA 37583 Query 243739 CGCCCTGGTGTGA 243751 | ||||||||| Sbjct 37582 AG-GCTGGTGTGA 37571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875266232250