Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq48 199 4e-46 seq47 197 1e-45 seq38 100 3e-16 >seq48 Length=263890 Score = 199 bits (220), Expect = 4e-46 Identities = 380/552 (69%), Gaps = 11/552 (2%) Strand=Plus/Minus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA--AGTCA 132952 || || || ||| ||| || || || || | | ||||| ||||| |||| ||| | Sbjct 116812 CACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTT--TGAATAAGTTA 116755 Query 132953 AGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGA 133012 ||| ||||| |||||||| || || | ||| || |||| ||||| || ||||| | Sbjct 116754 GGCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAA 116695 Query 133013 AGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC-TTTGCTG 133071 ||| |||||||| || ||||| ||||||| | ||| | || ||| |||| |||| Sbjct 116694 AGATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTG-CTTCGTTTGTCA 116636 Query 133072 GCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCG 133131 | ||||| || ||||| ||||| || |||| |||||| || ||||| || ||| Sbjct 116635 GATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCG 116576 Query 133132 TTCAACAAACG-GAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATA 133190 | || | | | | | || || | ||||| || ||||| || || || Sbjct 116575 TCGAAGAGATATGCGCGTTGATTAAGATCCTTG-ACGTATGTATCGATAAGCAGAGAGTA 116517 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 |||| || || ||||| ||||| ||||| || || |||||| | |||||||| | Sbjct 116516 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 116457 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 | |||||||| | | || ||||| | |||||||||||| ||||| ||||| ||| Sbjct 116456 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 116397 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC--- 133367 ||| || || || || ||||| |||||||||| ||||||| | ||| || ||||| Sbjct 116396 GGCAAAGAATGCAAGGACGTGGGTGATGAAATGACGCTCGTCATTGTTTAATCGCTCGTT 116337 Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||||| || | | ||||| | ||| || |||||| ||||| || || || Sbjct 116336 CCAGTCGACAAGATCATGAGTGAGGTCAATCTCTTCCGAGGTCCAGAACGATGCTTCTGC 116277 Query 133428 TTTTTTGTACAT 133439 ||| |||||||| Sbjct 116276 TTTCTTGTACAT 116265 >seq47 Length=266373 Score = 197 bits (218), Expect = 1e-45 Identities = 382/556 (69%), Gaps = 17/556 (3%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| || |||||| ||||| ||||| || | ||||| ||||| ||| | ||| Sbjct 37925 GCAGGCGAAGTCGGTATGCATACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAA 37984 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 ||| ||||| | || || || || | |||||| |||| ||||| ||| || ||||| Sbjct 37985 GCCAGGCATTAATCCACGCTTCTTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAA 38044 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA---CGTGGCTTCTTTGCT 133070 | ||| || || || || || || || || ||||||||||| || | ||| | || Sbjct 38045 AATGCCTTCAACAGCAGCAAAGGCTACGAGACGCTCGCCGAAAACCGAGTGTTCGTCACT 38104 Query 133071 GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130 | ||||||||||| ||||| |||||||| |||| ||| || || || ||||| || Sbjct 38105 G---ATCCAGCGCAGAGCCCACTCGGCCTTGCGCTTGATGCAAGGAATAGTCTCGATAGC 38161 Query 133131 GTTCAACAAACGGAGTTTCTCTTCCGA--GGAACGC--ACGTAGGTGTCGATGAGGGTCG 133186 | ||| || ||| | | | | ||| || | | ||| ||||||||||| | Sbjct 38162 AT-CAAAAA--GGAAAT-CACGTTCGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAG 38217 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 | || | || ||||| | ||||||||| || || || ||||| ||||| || |||| Sbjct 38218 AGTAAGTCTCGGAGTGAATGTTCTCCATCATAATCTGGAACCCGTAGAAGCAACGTGCCT 38277 Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 | | ||||| ||||| | | ||| || |||| ||||| |||||||| ||||| || Sbjct 38278 CAGCGACCTGTACTTCGTTCGAGAAGCGTTCGAGAAGATTCTCGTTGACAATGCCATCAG 38337 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-- 133364 |||||| || || || || || | |||||| || ||| |||| |||| ||| Sbjct 38338 AGGCGGCAAAGAACGCGAGAACACGGGAGATGAAGAATCGTTCGCTGTCATTCAGGCGGT 38397 Query 133365 -CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCT 133423 | |||||| | ||| || || | |||| ||| || | ||||| || || |||| Sbjct 38398 TGTTCCAGTCATGAAGGTCTTTTGATAAATCCATCTCTTCCGCAGTCCAGAAAGAGGCCT 38457 Query 133424 CGGCTTTTTTGTACAT 133439 |||| || |||||||| Sbjct 38458 CGGCCTTCTTGTACAT 38473 >seq38 Length=308705 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || |||||||||||||| ||||| | || |||||| | | Sbjct 188624 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 188683 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | || || ||||| ||||| |||| || Sbjct 188684 GACACGATCGACAACG-TGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCA 188742 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | ||| ||||| ||||| || || | |||||||| |||||||| Sbjct 188743 ACAACGACTAATCTTCGCCGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAA 188802 Query 38423 CATCCAAAAGGA 38434 ||| || ||||| Sbjct 188803 CATTCAGAAGGA 188814 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || || || | || || ||| | | Sbjct 189080 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACGATTACTCTGGAGGTTGAGTCGTCG 189139 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 189140 GACACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCAG 189199 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| || ||||| ||| |||| || | ||||| || ||| |||||| Sbjct 189200 CAGCGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCCGATTACAAC 189259 Query 38424 ATCCAAAAGGAAGCGACGCTGCA-TTTGGTG 38453 ||||| ||||| |||| || || |||||| Sbjct 189260 ATCCAGAAGGAGTCGACTCTTCACCTTGGTG 189290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170705526400