Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq7 122 3e-22 seq23 107 8e-18 seq5 98.7 4e-15 seq224 96.9 1e-14 seq17 93.3 2e-13 seq3 91.5 6e-13 seq38 89.7 2e-12 seq67 84.2 9e-11 >seq7 Length=723438 Score = 122 bits (134), Expect = 3e-22 Identities = 247/364 (68%), Gaps = 7/364 (2%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 ||||||||||| || || ||||| || |||||||||||||| || ||| || | Sbjct 584118 CCTGAAGAAATATCTTCGATGGTGCTCCTCAAAATGAAAGAAACTGCCGAAGCATTCCTC 584177 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || | | | || | |||| | || |||||||| ||||||||||| | ||||| Sbjct 584178 GGCACCACTATCACCAACTCAGTCGTGACCGTTCCCGCGTATTTCAATGACTCTCAACGT 584237 Query 451364 CAAGCAACTAAAGATGCAGGA--CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 || ||||| || || || ||| ||||| | || | ||||| || || |||||||| | Sbjct 584238 CAGGCAACCAAGGACGCCGGAACCATAT--CCGGAATGAATGTCCTCCGTATTATTAACG 584295 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 |||| || || || || | || ||||| || | || ||| | | | || | Sbjct 584296 AACCAACTGCCGCGGCGATTGCTTATGGCCTCGACAA---AAAGGTGTCTGGCGAGCGTA 584352 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 || | || | || ||||| || ||||||||| |||| ||| || | | || |||| Sbjct 584353 ATGTCTTGATTTTCGATTTGGGAGGAGGAACTTTTGATGTTTCCCTATTGACGATCGAAG 584412 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601 | || | || ||||| || || || |||||| || ||||| || ||||| || ||| Sbjct 584413 AAGGTATTTTCGAAGTCAAAGCCACTGCTGGTGACACCCATCTTGGCGGTGAGGACTTTG 584472 Query 451602 ATAA 451605 | || Sbjct 584473 ACAA 584476 >seq23 Length=411388 Score = 107 bits (118), Expect = 8e-18 Identities = 244/363 (67%), Gaps = 7/363 (2%) Strand=Plus/Minus Query 451245 CTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTG 451304 |||||||||| || || ||||| || |||||||||||||| || ||| || ||| Sbjct 403903 CTGAAGAAATATCTTCGATGGTCCTCCTCAAAATGAAAGAAACCGCCGAAGCATTCCTTG 403844 Query 451305 GTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGC 451364 | | | | || | |||| | || ||||||||||| |||||||| | ||||| | Sbjct 403843 GCACCACTATCACCAACTCAGTCGTGACCGTTCCCGCTTACTTCAATGACTCTCAACGTC 403784 Query 451365 AAGCAACTAAAGATGCAGGA--CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 | ||||| || || || ||| |||| ||| || | ||||| || || || || ||||| Sbjct 403783 AGGCAACCAAGGACGCCGGAACCATA-TGC-GGAATGAATGTCCTCCGTATCATCAATGA 403726 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaa 451482 ||| || || || || | || ||||| || | || ||| | | | || | Sbjct 403725 ACCAACTGCCGCGGCGATTGCTTATGGCCTTGACAA---AAAGGTTTCTGGCGAGCGTAG 403669 Query 451483 TATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGA 451542 | | || | || ||| | || ||||||||| ||| ||| | | |||| ||||| Sbjct 403668 TGTCTTGATTTTCGATCTGGGAGGAGGAACTTTCGATGTTTCCCTGTTGACAATCGAAGA 403609 Query 451543 TGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 || | || ||||| || || || |||||| || ||||| || ||||| || |||| Sbjct 403608 AGGTATCTTCGAAGTCAAAGCCACTGCTGGTGACACCCATCTTGGCGGTGAGGACTTTGA 403549 Query 451603 TAA 451605 || Sbjct 403548 CAA 403546 >seq5 Length=946259 Score = 98.7 bits (108), Expect = 4e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || |||| || || || || || | || || || || || Sbjct 884039 AATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTC 883980 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| |||||| | | || ||| || || |||||||| || || |||||||| || Sbjct 883979 TGATACCATTGACAATGTGAAGGCAAAGATCCAGGATAAGGAGGGTATCCCTCCTGACCA 883920 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||| | || || | || || || || |||||||| | ||| | |||||||||| Sbjct 883919 ACAACGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAA 883860 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | || || | || ||||| Sbjct 883859 TATCCAAAAAGAATCGACTCTTCA 883836 >seq224 Length=14514 Score = 96.9 bits (106), Expect = 1e-14 Identities = 235/352 (67%), Gaps = 13/352 (4%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 ||||||||||| || || ||||| || |||||||||||||| || ||| || || Sbjct 8337 CCTGAAGAAATATCTTCGATGGTCCTCCTCAAAATGAAAGAAACCGCCGAAGCATTCCTT 8396 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || | ||| ||| |||| | || ||||||||||| |||||||| | ||||| Sbjct 8397 GG--CACCACCAACT----CAGTCGTGACCGTTCCCGCTTACTTCAATGACTCCCAACGT 8450 Query 451364 CAAGCAACTAAAGATGCAGGA--CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 || ||||| || || || ||| ||||| | | | ||||| || || || ||||||| Sbjct 8451 CAGGCAACCAAGGACGCCGGAACCATAT--CCAGAATGAATGTCCTCCGTATCATTAATG 8508 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 ||| || || || || | || ||||| || | || || | | | || | Sbjct 8509 AACTAACTGCCGCGGCGATTGCTTATGGCCTTGACAA---GAAGGTTTCTGGCGAGTGTA 8565 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 | | || | || ||| | || ||||||||| ||| ||| || | |||| |||| Sbjct 8566 ACGTCTTGATTTTCGATCTGGGAGGAGGAACTTTCGATGTTTCCCTATTGACAATCGAAG 8625 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGA 451593 | || | || | ||| || || || |||||| || ||||| || ||||| Sbjct 8626 AAGGTATCTTCGGAGTCAAAGCCACTGCTGGTGACACCCATCTTGGCGGTGA 8677 >seq17 Length=493145 Score = 93.3 bits (102), Expect = 2e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || || || || || |||||||| || ||||| ||||| || ||||| || Sbjct 409455 GCTGTCATCACGGTCCCTGCCTACTTCAATGACGCCCAACGTCAAGCCACGAAAGACGCT 409514 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || || ||||||||| | |||||||||| | || ||||||||||| || || || | Sbjct 409515 GGTCAGATTGCTGGTCTTGATGTTCTTCGTGTCATCAATGAACCTACGGCTGCCGCATTG 409574 Query 451442 GCATATGGACT 451452 || ||||| || Sbjct 409575 GCCTATGGTCT 409585 >seq3 Length=995293 Score = 91.5 bits (100), Expect = 6e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 391155 ATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 ||||||||||||||||||||||| || ||| | || || ||||| ||||||||| ||||| Sbjct 452223 ATTCCTCCTGATCAACAACGTTTGATCTTCGCCGGAAAGCAACTCGAAGATGGACGAACT 452164 Query 391215 TTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTA 391259 | | || ||||| ||| | ||||| | || || ||||| ||| Sbjct 452163 CTTTCCGACTATAACATTCAGAAGGAATCGACGCTCCACTTGGTA 452119 >seq38 Length=308705 Score = 89.7 bits (98), Expect = 2e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| || || || || ||||| || ||| | || || || || || Sbjct 188624 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 188683 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || || || || |||||||| || |||||||| |||||| Sbjct 188684 GACACGATCGACAACGTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCAA 188743 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| |||| ||| | || || || || ||||||||| | || | | || || || Sbjct 188744 CAACGACTAATCTTCGCCGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAAC 188803 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| |||| |||||| Sbjct 188804 ATTCAGAAGGAGTCAACCCTTCAC 188827 >seq67 Length=206472 Score = 84.2 bits (92), Expect = 9e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 391153 GAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAA 391212 ||||||| ||||||||||| || | |||||| | || ||||||||||| |||||| | | Sbjct 157833 GAATTCCCCCTGATCAACAGCGACTCATTTTCGCTGGAAAACAACTTGAGGATGGACGTA 157892 Query 391213 CTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258 || || ||||| || ||| | || || | || ||||||||||| Sbjct 157893 CTCTGAGTGATTACAACATTCAGAAAGAATCCACCCTTCACTTAGT 157938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975709919846180