Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq7 176 3e-38 seq23 170 1e-36 seq224 158 9e-33 seq68 129 4e-24 seq17 86.0 5e-11 >seq7 Length=723438 Score = 176 bits (194), Expect = 3e-38 Identities = 460/693 (66%), Gaps = 14/693 (2%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||||||||||| ||||| | ||||| |||||||| | || || ||||| || ||| Sbjct 585305 TTATCAGCGGCAGAAACATTCAAGATACCGTTGGCATCGATGTCGAAGGTGACCTCGATT 585246 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 ||||| || || | ||||||||||||| || | | ||| | || || || Sbjct 585245 TGAGGTACACCACGGGGAGCAGGTGGGATACCAGAAAGCTCGAATTTCCCAAGGAGGTTG 585186 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 || || |||||| |||||||||||||| | |||||| || ||| ||| ||| Sbjct 585185 TTGTCCTTAGTGCGAGCACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGTTGGTTA 585126 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489 || | ||||||| || | || || ||| || | || ||||| | | || Sbjct 585125 TCGGCGTAAGTTGAGAAGGTTTCAGACTTCTTAGTCGGGACAGTGGTGTTACGCTTGATG 585066 Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549 | |||||| | |||||| || ||||| | ||| || || || |||| ||| || | Sbjct 585065 AGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGGGAGAGGGGAGAGACGTCGAGG 585006 Query 517550 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 517609 || | | || ||| || ||| ||| | ||| ||||| || ||||| | |||| Sbjct 585005 AGAAGTAGATCCTGAGTCTTCTCAGAAGTGTCACCGGATAGAATCGCAGCTTGGACAGCA 584946 Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 ||||| || |||||||| ||||| || |||| | | || | | |||||||| || Sbjct 584945 GCACCGTAGGCAACAGCCTCATCGGGGTTAATGCTCTTGTTGGGCTCCTTACCATTAAAG 584886 Query 517670 AAATTTGA-AAGAAGTTGTC-TTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727 || | || | || ||| | ||| ||||||||||| ||| || || || | || | Sbjct 584885 AAGTCGGAGACGAGCTTGACGATAC--GAGGAATACGAGTTGAACCGCCGACAAGGACGA 584828 Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 517787 |||| ||||| | | ||||| | || ||||| | || || || || || || | Sbjct 584827 TTTCGTGCACATTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCGA 584768 Query 517788 GACCCGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGTG 517843 || ||| | || | |||| || ||||| ||||| ||| | ||||| |||| Sbjct 584767 GA-GTGCTACGGAAAAGGTCTTGGCAGAGTTCCTCGAAACGAGCACGTGTAAGGGAAGTG 584709 Query 517844 ACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 517902 || || ||||| || || |||| ||||| | ||| |||| || |||| | ||| Sbjct 584708 ----TAGAAGTCAATACCCTCATACAAGGAATCGATTTCGATCGAGGTCTGAGCGGCAGA 584653 Query 517903 AGATAGTGCACGTTTAGCACGTTCACATGCTGT 517935 ||| | | ||| || |||||||| || || || Sbjct 584652 AGACAAAGTACGCTTGGCACGTTCGCAAGCGGT 584620 Score = 87.8 bits (96), Expect = 1e-11 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 518540 GGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAAT 518599 || || || || |||| | || || ||||| || || ||| | ||| || || || Sbjct 583850 GGGTTCATCGCGACTTGGTTCTTTGCGGCATCACCGATAAGACGCTCTCCGTCGGTGAAG 583791 Query 518600 GAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCA 518659 | ||||| || || || || || |||||||| ||||| ||||||||||||||| | | Sbjct 583790 GCGACATAGGAAGGCGTCGTTCGGTTACCTTGGTCATTGGCAATAATTTCAACTCGATCG 583731 Query 518660 TTTTGCCATACACCTACACAACT 518682 |||||||| ||||| ||||| || Sbjct 583730 TTTTGCCACACACCGACACACCT 583708 >seq23 Length=411388 Score = 170 bits (188), Expect = 1e-36 Identities = 461/694 (66%), Gaps = 16/694 (2%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||||||||||| ||||| | |||||| |||||||| | ||||| ||||| |||||| Sbjct 402714 TTATCAGCGGCAGAAACATTCAAAATACCGTTGGCATCGATGTCAAAGGTGACCTCAATT 402773 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCC-AGATTATT 517368 ||||| || || | ||||||||||||| || || | | ||||| || || Sbjct 402774 TGAGGTACACCACGGGGAGCAGGTGGGAT-ACTAGAAAGCTCGAACTTCCCAAGGAGGTT 402832 Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428 || || |||||| |||||||||||||| | |||||| || ||| ||| || Sbjct 402833 GTTGTCCTTAGTGCGAGCACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGTTGGTT 402892 Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 517488 ||| | ||||||| ||| | || || || || | || ||||| | | || Sbjct 402893 ATCAGCGTAAGTTGAAAAGGTTTCAGACTTCTTGATCGGGACAGTGGTGTTACGCTTGAT 402952 Query 517489 AATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 517548 |||||| | |||||| || ||||| | ||| ||||| || |||| ||| || | Sbjct 402953 GGGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGAGAGAGGGGAGAGACGTCGAG 403012 Query 517549 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 517608 || | | || ||| || ||| ||| | ||| || || || ||||| | ||| Sbjct 403013 GAGAAGTAGATCCTGAGTCTTCTCAGAAGTGTCACCGGATAGGATCGCAGCTTGGACAGC 403072 Query 517609 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 517668 |||||| || |||||||| |||||||| || | | | || | | ||||||||||| Sbjct 403073 AGCACCGTAGGCAACAGCCTCATCAGGGTTGATGCTCTTGTTGGGCTCCTTACCATTGAA 403132 Query 517669 AAAATTTGA-AAGAAGTTGTC-TTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 517726 || | || | || ||| | ||| ||||||||||| || || || || | || Sbjct 403133 GAAGTCGGAGACGAGCTTGACGATAC--GAGGAATACGAGTCGAACCGCCGACAAGGACG 403190 Query 517727 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 517786 ||||| || || | | ||||| | || ||||| | || || || || || || Sbjct 403191 ATTTCGTGTACGTTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCG 403250 Query 517787 AGACCCGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGT 517842 ||| ||| | || | | | || ||||| ||||| || | ||||| ||| Sbjct 403251 AGA-GTGCTACGGAAAAGGCCCTGGCAGAGTTCCTCGAAACGGGCACGTGTAAGGGAAGT 403309 Query 517843 GACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAG 517901 | || || ||||| || || |||| ||||||| ||| |||| || |||| | || Sbjct 403310 G----TAGAAGTCAATACCCTCATACAAGGAATCAATTTCGATCGAGGTCTGAGCGGCAG 403365 Query 517902 AAGATAGTGCACGTTTAGCACGTTCACATGCTGT 517935 |||||| | ||| || |||||||| || || || Sbjct 403366 AAGATAAAGTACGCTTGGCACGTTCGCAAGCAGT 403399 >seq224 Length=14514 Score = 158 bits (174), Expect = 9e-33 Identities = 457/695 (66%), Gaps = 19/695 (3%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||||||||||| ||||| | | |||| |||||||| | ||||| ||||| |||||| Sbjct 9520 TTATCAGCGGCAGAAACATTCAAACTACCGTTGGCATCGATGTCAAAGGTGACCTCAATT 9461 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 ||||| || || | ||||||||||||| || | | ||| | || || || Sbjct 9460 TGAGGTACACCACGGGGAGCAGGTGGGATACCAGAAAGCTCAAACTTCCCAAGGGGGTTG 9401 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 || || |||||| |||||||||||||| | |||||| || ||| ||| ||| Sbjct 9400 TTGTCCTTAGTGCGAGCACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGTTGGTTA 9341 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489 || | ||||||| || | || | || || | || ||||| | | || Sbjct 9340 TCGGCGTAAGTTGAGAAGGTTTCAGACTCCTTGGTCGGGACAGTGGTGTTACGCTTGATG 9281 Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549 | |||||| | |||||| || ||||| | ||| ||||| || |||| ||| || | Sbjct 9280 AGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGAGAGAGGGGAGAGACGTCGAGG 9221 Query 517550 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 517609 || | | || ||| || ||| ||| | ||| | ||| || ||||| | |||| Sbjct 9220 AGAAGTAGATCCTGAGTCTTCTCAGAAGTGTCACCGGATAAAATCGCAGCTTGGACAGCA 9161 Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 ||||| || |||||||| || ||||| || | | | || | | |||||||| || Sbjct 9160 GCACCGTAGGCAACAGCCTCGTCAGGGTTGATGCTCTTGTTGGGCTCCTTACCATTAAAG 9101 Query 517670 AAATTTGA-AAGAAGTTGTC-TTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727 || || || | || ||| | ||| ||||||| ||| ||| || || || | |||| Sbjct 9100 AAGTTGGAGACGAGCTTGACGATAC--GAGGAATATGAGTTGAACCGCCGACAAGGACAA 9043 Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 517787 |||| ||||| | | | ||| | || ||||| | || || || || || || | Sbjct 9042 TTTCGTGCACATTGGCCTCATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCGA 8983 Query 517788 GACCCGCTCTA---AACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AG 517841 || | ||| || | ||| || | ||| ||||| || | ||||| || Sbjct 8982 GA---GTACTACGGAAAAGGTCCTGGCAGAATTCCTCGAAACGGGCGCGTGTAAGGGAAG 8926 Query 517842 TGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAA 517900 || || || ||||| || || |||| ||||| | ||| |||| ||| |||| | | Sbjct 8925 TG----TAGAAGTCAATACCCTCATACAAGGAATCGATTTCGATCGAAGTCTGAGCAGCA 8870 Query 517901 GAAGATAGTGCACGTTTAGCACGTTCACATGCTGT 517935 ||||||| | ||| || |||||| | || || || Sbjct 8869 GAAGATAAAGTACGCTT-GCACGTCCGCAAGCAGT 8836 >seq68 Length=203216 Score = 129 bits (142), Expect = 4e-24 Identities = 450/693 (65%), Gaps = 16/693 (2%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 |||||||| |||| |||| |||||| |||||||| | ||||| ||||| |||||| Sbjct 133335 TTATCAGCAGCAGAAACATCCGAAATACCGTTGGCATCGATGTCAAAGGTGACCTCAATT 133394 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 ||||| | || ||||||||||||| || | ||| | || || || Sbjct 133395 TGAGGTGCACCATGGGGAGCAGGTGGGATACCAGAAGGCTCAAACTTCCCAAGGAGGTTG 133454 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 || || |||||| | |||||||||| ||| | |||||| || ||| ||| || Sbjct 133455 TTGTCCTTAGTGCAAGCACGTTCACCCTTGAAGACTTGGATGAGCACATCAGATTGGTTG 133514 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 517489 || | ||||||| || | || || || || | || ||||| | | || Sbjct 133515 TCGGCGTAAGTTGAGAAGGTTTCAGACTTCTTGGTCGGGACAGTGGTGTTACGCTTGATG 133574 Query 517490 ATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 517549 | |||||| | |||||| || ||||| | ||| ||||| || |||| ||| || | Sbjct 133575 AGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGAGAGAGGGGAGAGACGTCGAGG 133634 Query 517550 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 517609 || | | || ||| | |||| ||| | ||| | ||| || ||||| | |||| Sbjct 133635 AGAAGTAGATCCTGAG--TCTTCAGAAGTGTCACCGGATAAAATCGCAGCTTGGACAGCA 133692 Query 517610 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 517669 ||||| || |||||||| || ||||| || | | | || | || |||||||| || Sbjct 133693 GCACCGTAGGCAACAGCCTCGTCAGGGTTGATGCTCTTGTTGGGCTTCTTACCATTAAAG 133752 Query 517670 AAATTTGAAAGAAG-TTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727 || | || | || ||| | ||| ||||||||||| ||| || || || |||| Sbjct 133753 AAGTCGGAGACGAGCTTGACGATACG--AGGAATACGAGTTGAACCGCCGACAGGGACAA 133810 Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 517787 |||| ||||| | | ||||| | || ||||| | || || || || || || | Sbjct 133811 TTTCGTGCACATTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCGA 133870 Query 517788 GACCCGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGTG 517843 || ||| | || | ||| || ||||| || || || ||||| |||| Sbjct 133871 GA-GTGCTACAGAAAAGGTCCTGGCAGAGTTCCTCAAAACAGGCATGTGTAAGGGAAGTG 133929 Query 517844 ACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 517902 || || ||||| || | |||| ||||||| ||| |||| || |||| | ||| Sbjct 133930 ----TAGAAGTCAATACCCTTATACAAGGAATCAATTTCGATCGAGGTCTGAGCGGCAGA 133985 Query 517903 AGATAGTGCACGTTTAGCACGTTCACATGCTGT 517935 ||| | | | | || |||||||| || || || Sbjct 133986 AGAAAAAGTATGCTTGGCACGTTCGCAAGCAGT 134018 >seq17 Length=493145 Score = 86.0 bits (94), Expect = 5e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || ||||||||||| || || || ||||| || |||||||| || | | | |||| Sbjct 409594 TTCTTGTCAAGACCATAGGCCAATGCGGCAGCCGTAGGTTCATTGATGACACGAAGAACA 409535 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 | |||||||||||| || || ||||| |||||||| | ||| | || || || || Sbjct 409534 TCAAGACCAGCAATCTGACCAGCGTCTTTCGTGGCTTGACGTTGGGCGTCATTGAAGTAG 409475 Query 518285 GCAGGAACAGTAATAACGGC 518304 ||||| || || || || || Sbjct 409474 GCAGGGACCGTGATGACAGC 409455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780805776196510