Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq34 82.4 9e-11 >seq34 Length=329079 Score = 82.4 bits (90), Expect = 9e-11 Identities = 189/279 (68%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 110861 TGGCACGAATGTCGTGGATATGC--ATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 |||| || |||| || ||||| || || || ||||| || | || || || || Sbjct 277293 TGGCCCGGATGTTATG--TATGCTAATTCCTATGCCACCGGCTGATTTGCTGATCAAAGC 277236 Query 110919 ACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAA 110978 ||| | | | || ||| | || ||||| || || ||||| | || || || || || Sbjct 277235 ACAGTTTTTCAGGGTATCGTAGATACCTTCGATAGAATCATCTTTCATGCAAACAAGGAA 277176 Query 110979 GCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAAT 111038 ||| || ||||| ||||| ||| || || ||||||||||| || || || |||||| | Sbjct 277175 GCATGAGGACATTTGAGGCGAAGGGGTACCGGCATTGAAGAGAGTGGGAGTGGCATGAGT 277116 Query 111039 GAACAGACCTTGGGACATCTTGTTGTATGTGTCG--AGTGCGGAGGGTACATCTTTACCG 111096 ||| | | |||||| ||||||||| ||| || | | | ||| | ||| Sbjct 277115 GAAATATCGCTCGGACATGAGGTTGTATGT-TCGCAAGACATGCTCG-ATATCGTCTCCG 277058 Query 111097 TGAATACCAATGGCAACTCGCATGAACATATATTGAGGC 111135 || || |||| || || ||||||| ||||| ||| ||| Sbjct 277057 TGTATCCCAACAGCGACCCGCATGATCATATGTTGTGGC 277019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973533663000