Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq23 161 8e-34 seq7 156 3e-32 seq224 134 1e-25 seq17 122 7e-22 seq5 95.1 1e-13 seq67 86.0 5e-11 >seq23 Length=411388 Score = 161 bits (178), Expect = 8e-34 Identities = 464/711 (65%), Gaps = 22/711 (3%) Strand=Plus/Minus Query 551899 TTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAA 551958 |||||||||| | |||||||||||| | ||||| || || | || |||| |||| | Sbjct 403413 TTCGTCGTCTCCGTACTGCTTGCGAACGTGCCAAGCGTACTTTATCTTCTGCCGCTCAGA 403354 Query 551959 CCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGG 552018 || | || ||| | ||||| || | |||||| ||||| | | || | || | | | Sbjct 403353 CCTCGATCGAAATTGATTCCTTGTATGAGGGTATTGACTTCTACACTTCCCTTACACGTG 403294 Query 552019 CCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAG 552078 || || || || | || | || || | | || | || || || || | | Sbjct 403293 CCCGTTTCGAGGAACTCTGCCAGGGCCTTTTCCGTAGCACTCTCGATCCTGTCGAGAAGG 403234 Query 552079 TTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGAT 552138 | | | ||||| ||||||||||| |||| ||||| ||||| || ||||| || || | Sbjct 403233 TCCTTCGCGATTCCAAGATTGATAAGGCCAACGTACACGAAATCGTCCTTGTCGGCGGTT 403174 Query 552139 CTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTAT--------TTCAATGGTAA 552190 | || | |||||| || | || ||| || | | ||||||||||| Sbjct 403173 CGACTCGTATTCCT--------CGTATCGTCAAGCTCGTCTCCGACTTCTTCAATGGTAA 403122 Query 552191 AAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGC 552250 | || | || | || || ||||||||||||||||| ||||| || | ||||| Sbjct 403121 GGAGCCCAACAAGAGCATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCTGTCCAAGC 403062 Query 552251 AGCTATTCTTTCTGGACAAACTGATGA-AAAACTACAAAATATTGTACTTGTAGATGTTA 552309 || || || || || | ||| ||| || ||| || || | | || | || || Sbjct 403061 TGCGATCCTATCCGGTGACACTTCTGAGAAGACT-CAGGATCTACTTCTCCTCGACGTCT 403003 Query 552310 CTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAA 552369 |||| || ||||| ||| | ||||| | ||| ||| | ||||| | ||| | | | Sbjct 403002 CTCCCCTCTCTCTCGGTATTGAAACTGCTGGTGGTGTGATGACCGCACCCATCAAGCGTA 402943 Query 552370 ATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTG 552429 | || ||| | || || || ||| ||||| || || | ||||| ||| ||| Sbjct 402942 ACACCACTGTCCCGATCAAGAAGTCTGAAACCTTTTCAACTTACGCTGATAACCAACCTG 402883 Query 552430 CTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTG 552489 ||| || ||| | || || || ||| | |||||| || || || | |||| Sbjct 402882 GTGTGCTCATCCAAGTCTTCGAGGGTGAACGTGCTCGCACTAAGGACAACAACCTCCTTG 402823 Query 552490 GTACTTTTAA--TTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT 552547 | | || | ||| | |||| || |||||||| ||||| ||||| |||||||| || Sbjct 402822 GGAAGTTCGAGCTTTCTA--GTATCCCACCTGCTCCCCGTGGTGTACCTCAAATTGAGGT 402765 Query 552548 TACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 || || || ||||||||||| || ||||||||||| |||| |||||| Sbjct 402764 CACCTTTGACATCGATGCCAACGGTATTTTGAATGTTTCTGCCGCTGATAA 402714 Score = 96.9 bits (106), Expect = 3e-14 Identities = 157/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 550319 TCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTT 550378 ||| | ||| |||| || || ||||| | | ||||||||| |||| ||| || || Sbjct 403907 TCATCTGAAGAAATATCTTCGATGGTCCTCCTCAAAATGAAAGAAACCGCCGAAGCATTC 403848 Query 550379 GTTGGT-CAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACA 550437 |||| | | | | || | |||| | || || || || || || |||||||| || Sbjct 403847 CTTGGCACCACTA-TCACCAACTCAGTCGTGACCGTTCCCGCTTACTTCAATGACTCTCA 403789 Query 550438 ACGTCAAGCTACTAAAGATGCTGGACGTAT-TGCTGGACTTAATGTTCTTCGTATTATCA 550496 |||||| || || || || || ||| || ||| ||| | ||||| || ||||| |||| Sbjct 403788 ACGTCAGGCAACCAAGGACGCCGGAACCATATGC-GGAATGAATGTCCTCCGTATCATCA 403730 Query 550497 ATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 ||||||| ||||| || || |||| ||||| ||||| ||| Sbjct 403729 ATGAACCAACTGCCGCGGCGATTGCTTATGGCCTTGACAAA 403689 >seq7 Length=723438 Score = 156 bits (172), Expect = 3e-32 Identities = 459/702 (65%), Gaps = 4/702 (1%) Strand=Plus/Plus Query 551899 TTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAA 551958 |||||||||| | || ||||||||| | ||||| || || | || |||| |||| | Sbjct 584606 TTCGTCGTCTCCGTACCGCTTGCGAACGTGCCAAGCGTACTTTGTCTTCTGCCGCTCAGA 584665 Query 551959 CCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGG 552018 || | || ||| | ||||| || | |||||| ||||| | | || | || | | | Sbjct 584666 CCTCGATCGAAATCGATTCCTTGTATGAGGGTATTGACTTCTACACTTCCCTTACACGTG 584725 Query 552019 CCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAG 552078 | || || || | || || || || | | || | || || || || | | Sbjct 584726 CTCGTTTCGAGGAACTCTGCCAAGACCTTTTCCGTAGCACTCTCGATCCTGTCGAGAAGG 584785 Query 552079 TTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGAT 552138 | | | ||||| ||||||||||| |||| || || ||||| || ||||| || || | Sbjct 584786 TCCTTCGCGATTCCAAGATTGATAAGGCCAATGTGCACGAAATCGTCCTTGTCGGCGGTT 584845 Query 552139 CTACAAGAATTCCTAAAATTCGCGAAAT-GTTAAGTTCTTATTTCAATGGTAAAAAATTA 552197 | || | |||||| || | | | || ||| ||| |||||||| | Sbjct 584846 CAACTCGTATTCCTCGTATCGTCAAGCTCGTCTCCGACTTCTTT-AATGGTAAGGAGCCC 584904 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | || |||| || ||||||||||||||||| ||||| || | ||||| || ||| Sbjct 584905 AACAAGAGCATTAACCCCGATGAGGCTGTTGCCTACGGTGCTGCTGTCCAAGCTGCGATT 584964 Query 552258 CTTTCTGGACAAACTGATGAAAA-ACTACAAAATATTGTACTTGTAGATGTTACTCCTCT 552316 || || || | ||| ||| || ||| || || | | || | || || |||| || Sbjct 584965 CTATCCGGTGACACTTCTGAGAAGACT-CAGGATCTACTTCTCCTCGACGTCTCTCCCCT 585023 Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376 || || ||| | ||||| | ||| ||| | ||||| || ||| | | || || || Sbjct 585024 CTCCCTCGGTATTGAAACTGCTGGTGGTGTGATGACCGCACTCATCAAGCGTAACACCAC 585083 Query 552377 TATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTAC 552436 | | || ||| || ||| || || || || | ||||| ||| ||| ||| Sbjct 585084 TGTCCCGACTAAGAAGTCTGAAACCTTCTCAACTTACGCCGATAACCAACCTGGTGTGCT 585143 Query 552437 AATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTT 552496 || ||| | || || || ||| | |||||| || || || | ||||| | || Sbjct 585144 CATCCAAGTCTTCGAGGGTGAACGTGCTCGCACTAAGGACAACAACCTCCTTGGGAAATT 585203 Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556 | | ||||| || |||||||| ||||| ||||| ||||| || || || ||||| Sbjct 585204 CGAGCTTTCTGGTATCCCACCTGCTCCCCGTGGTGTACCTCAAATCGAGGTCACCTTCGA 585263 Query 552557 TATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 ||||||||||| || || |||||||| |||| |||||| Sbjct 585264 CATCGATGCCAACGGTATCTTGAATGTTTCTGCCGCTGATAA 585305 Score = 96.9 bits (106), Expect = 3e-14 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 550019 TATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGT 550078 || || ||||| ||||| |||||||| | | ||||||||||||||||||||| |||||| Sbjct 583705 TACAGGTGTGTCGGTGTGTGGCAAAACGATCGAGTTGAAATTATTGCCAATGACCAAGGT 583764 Query 550079 AACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCA 550138 ||| |||| || || || ||||| | ||||| || || | | | | |||||||| Sbjct 583765 AACCGAACGACGCCTTCCTATGTCGCCTTCACCGACGGAGAGCGTCTTATCGGTGATGCC 583824 Query 550139 GCAAAATATCAAG 550151 ||||| | |||| Sbjct 583825 GCAAAGAACCAAG 583837 >seq224 Length=14514 Score = 134 bits (148), Expect = 1e-25 Identities = 455/702 (65%), Gaps = 5/702 (1%) Strand=Plus/Plus Query 551899 TTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAA 551958 |||||||||| | |||||||||| | | || || || || | || |||| | |||| | Sbjct 8822 TTCGTCGTCTTCGTACTGCTTGCGGACGTGC-AAGCGTACTTTATCTTCTGCTGCTCAGA 8880 Query 551959 CCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGG 552018 | | || ||| | ||||| || | |||||| ||||| | | || | || | | | Sbjct 8881 CTTCGATCGAAATCGATTCCTTGTATGAGGGTATTGACTTCTACACTTCCCTTACACGCG 8940 Query 552019 CCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAG 552078 || || || || | || || || || | | || | || || || || | | Sbjct 8941 CCCGTTTCGAGGAATTCTGCCAGGACCTTTTCCGTAGTACTCTCGATCCTGTCGAGAAGG 9000 Query 552079 TTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGAT 552138 | | | ||||| ||||||||| | |||| || || |||||||| ||||| || || | Sbjct 9001 TCCTTCGCGATTCCAAGATTGATGAGGCCAATGTGCACGAAATTGTCCTTGTCGGCGGTT 9060 Query 552139 CTACAAGAATTCCTAAAATTCGCGAAAT-GTTAAGTTCTTATTTCAATGGTAAAAAATTA 552197 | || |||||| || | | | || ||| ||| |||||||| | Sbjct 9061 CAACTCATATTCCTCGTATCGTCAAGCTCGTCTCCAACTTCTTT-AATGGTAAGGAGCCC 9119 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | || | || || || |||||||||||||| ||||| || | ||||| || ||| Sbjct 9120 AACAAGAGCATCAACCCTGACGAGGCTGTTGCCTACGGTGCTGCTGTCCAAGCTGCGATT 9179 Query 552258 CTTTCTGGACAAACTGATGAAAA-ACTACAAAATATTGTACTTGTAGATGTTACTCCTCT 552316 | || || | ||| ||| || ||| || || | | || | || || |||| || Sbjct 9180 TTATCCGGTGACACTTCTGAGAAGACT-CAGGATCTACTTCTCCTCGACGTCTCTCCCCT 9238 Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376 ||||| ||| | ||||| | ||| ||| | ||||| || ||| | | || || || Sbjct 9239 CTCTCTCGGTATTGAAACTGCTGGTGGTGTGATGACCGCACTCATCAAGCGTAACACCAC 9298 Query 552377 TATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTAC 552436 | | || || | ||| || || || || | ||||| ||| ||| ||| Sbjct 9299 TGTCCCGACCAAGGAGTCTGAAACCTTCTCAACTTACGCCGATAACCAACCTGGTGTGCT 9358 Query 552437 AATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTT 552496 || ||| | || || || ||| | |||||| || || || | ||||| | || Sbjct 9359 CATCCAAGTCTTCGAGGGTGAACGTGCTCGCACTAAGGACAACAACCCCCTTGGGAAGTT 9418 Query 552497 TAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556 | | | ||||| || |||||||| ||||| ||||| |||||||| || || || || Sbjct 9419 TGAGCTTTCTGGTATCCCACCTGCTCCCCGTGGTGTACCTCAAATTGAGGTCACCTTTGA 9478 Query 552557 TATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 ||||||||||| || | ||||||||| |||| |||||| Sbjct 9479 CATCGATGCCAACGGTAGTTTGAATGTTTCTGCCGCTGATAA 9520 Score = 91.5 bits (100), Expect = 1e-12 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 550022 AGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAAC 550081 || ||||| ||||| |||||||| | | ||||||||| ||||||||||| ||||||||| Sbjct 7927 AGGTGTGTCGGTGTGTGGCAAAACGATTGAGTTGAAATCATTGCCAATGACCAAGGTAAC 7986 Query 550082 AGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCA 550141 ||| || || || ||||| | ||||| || || ||| | | |||||||| ||| Sbjct 7987 CGAAGGACGCCTTCCTATGTCGCCTTCACCGATGGCGAGCATCTTATCGGTGATGCCGCA 8046 Query 550142 AAATATCAAG 550151 || | |||| Sbjct 8047 AAGAACCAAG 8056 >seq17 Length=493145 Score = 122 bits (134), Expect = 7e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || || || || || || || |||||| | ||||||||||| || ||||| ||| Sbjct 409455 GCTGTCATCACGGTCCCTGCCTACTTCAATGACGCCCAACGTCAAGCCACGAAAGACGCT 409514 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || | |||||||| ||| ||||||||||| | |||||||||||||| ||||| ||| | Sbjct 409515 GGTCAGATTGCTGGTCTTGATGTTCTTCGTGTCATCAATGAACCTACGGCTGCCGCATTG 409574 Query 550520 GCATATGGACTTGATAA 550536 || ||||| ||||| || Sbjct 409575 GCCTATGGTCTTGACAA 409591 >seq5 Length=946259 Score = 95.1 bits (104), Expect = 1e-13 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| ||||||||||| || |||||| ||||| ||||| | ||||| | Sbjct 883821 AGACGGAGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGTGCGG 883880 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || || ||||| ||||| ||||| | ||| || |||||||| || || || Sbjct 883881 CCATCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACCCTCC 883940 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG 563416 ||||| || || ||| || || ||||| ||||||| Sbjct 883941 TTATCCTGGATCTTTGCCTTCACATTGTCAATGGTATCAG 883980 >seq67 Length=206472 Score = 86.0 bits (94), Expect = 5e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | |||||||| |||||| ||| ||||||||| ||||| | | Sbjct 157947 AGACGCAGCACTAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCACTCAGAGTACGT 157888 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 ||| |||||||||||||| || ||||| |||| || |||||||| ||||||| Sbjct 157887 CCATCCTCAAGTTGTTTTCCAGCGAAAATGAGTCGCTGTTGATCAGGGGGAATTC 157833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029278283689150