Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq34 93.3 5e-14 >seq34 Length=329079 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| | ||| ||||||||||||| | || || ||||| || || || || |||| Sbjct 277020 CCACAACATATGATCATGCGGGTCGCTGTTGGGATACACGGAGACGATATCGAGCATGTC 277079 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 ||| |||||| || |||||| | | ||| |||| ||| || || || || ||||| Sbjct 277080 TTGCGAACATACAACCTCATGTCCGAGCGATAT-TTCACTCATGCCACTCCCACTCTCTT 277138 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| ||||| || || || |||||| ||||||||| | || || || || Sbjct 277139 CAATGCCGGTACCCCTTCGCCTCAAATGTCCTCATGCTTCCTTGTTTGCATGAAAGATGA 277198 Query 75391 CTCAATCAACGGTATCTA 75408 || ||| | |||||||| Sbjct 277199 TTCTATCGAAGGTATCTA 277216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567101864800