Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08]
335 sequences; 41,818,685 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq133 89.7 2e-12
>seq133
Length=91674
Score = 89.7 bits (98), Expect = 2e-12
Identities = 219/329 (67%), Gaps = 10/329 (3%)
Strand=Plus/Minus
Query 302544 TACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAAT 302603
|||||| |||||||| || ||||| |||||| | || | || ||||| || ||
Sbjct 76784 TACGGTTCCATCATAACAAACCATAACGTCTTCGAGGGCTTTCACCAATCGACGTTGTAT 76725
Query 302604 ATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGC 302663
||| || ||| | || || || || ||||| || ||||| | || || |||| ||
Sbjct 76724 ATATCCGGTTTCGGCAGTCTTGACTGCAGTATCGATGAGACCTTCTCGCCCCGCCATGGC 76665
Query 302664 ATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACG 302723
||||||||| | ||| | || || || | | | | ||| |||| |||||||| ||
Sbjct 76664 ATGGAAGAAGAACTCCTGAGGGGTGAGACCTCGTAGATAAGAGTTCTCTACGAAACCCCG 76605
Query 302724 CGCCTCGGG---CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCC 302780
| ||| || |||| || |||||||||||| ||||| || | || ||||
Sbjct 76604 GGACTCAGGACTGAAATCATC---CTTGGTAAAGTGAGGCAGCGTGCGGTGACGGAAGCC 76548
Query 302781 GTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAAT 302840
| |||||||| || || ||| |||||||| | || | |||||| || ||
Sbjct 76547 AAAAGGGATACGACGCCCTTCCACGGATTGCTGTCCTACACAAACAGACATCTGGGAGAT 76488
Query 302841 ATT--TAAATCACTGCCCTTGGAGCCAGC 302867
||| | ||| | || ||||| |||||
Sbjct 76487 ATTGATGAATGA--ACCTTTGGATCCAGC 76461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471811282682895
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |