Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08]
335 sequences; 41,818,685 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq47 127 3e-23
>seq47
Length=266373
Score = 127 bits (140), Expect = 3e-23
Identities = 227/328 (69%), Gaps = 5/328 (2%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTT-GCTAAAGCAGAGGCCGGGCATGAGGCCGCGCT 794398
||| || || |||||||| | ||||| | || || || || ||||| | || ||||
Sbjct 37946 ACCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAAG-CCAGGCATTAATCCACGCT 38004
Query 794399 TCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458
|||| | ||||||||||| ||| ||| ||||| || ||||| || || || ||||
Sbjct 38005 TCTTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAAAATGCCTTCAACAGCAGCAA 38064
Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518
|| | ||||| |||||| | ||| || | || | ||||||| || ||||
Sbjct 38065 AGGCTACGAGACGCTCGCCGAAAA---CCGAGTGTTCGTCACTGATCCAGCGCAGAGCCC 38121
Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578
|||| ||||| | | | | || | || ||||| || ||| ||| || |
Sbjct 38122 ACTCGGCCTTGCGCTTGATGCAAGGAATAGTCTCGATAGCATCAAAAAGGAAATCACGTT 38181
Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638
|||| ||||| |||| ||| ||||||||||| || ||||| ||||| ||||| ||||| |
Sbjct 38182 CGACAGGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAGTCTCGGAGTGAATGTTCT 38241
Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCA 794666
| || |||||||| || || |||||
Sbjct 38242 CCATCATAATCTGGAACCCGTAGAAGCA 38269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916210764522065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |