Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq7 181 8e-40 seq23 176 3e-38 seq224 165 6e-35 seq68 132 4e-25 seq133 86.0 5e-11 seq17 86.0 5e-11 >seq7 Length=723438 Score = 181 bits (200), Expect = 8e-40 Identities = 461/693 (67%), Gaps = 14/693 (2%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||||||||||| ||||| | ||||| |||||||| | || || ||||| || ||| Sbjct 585305 TTATCAGCGGCAGAAACATTCAAGATACCGTTGGCATCGATGTCGAAGGTGACCTCGATT 585246 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| || || | ||||||||||||| || | | ||| | || || || Sbjct 585245 TGAGGTACACCACGGGGAGCAGGTGGGATACCAGAAAGCTCGAATTTCCCAAGGAGGTTG 585186 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || || |||||| |||||||||||||| | |||||| || ||| ||| ||| Sbjct 585185 TTGTCCTTAGTGCGAGCACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGTTGGTTA 585126 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 281656 || | ||||||| || | || || ||| || | || ||||| | | || Sbjct 585125 TCGGCGTAAGTTGAGAAGGTTTCAGACTTCTTAGTCGGGACAGTGGTGTTACGCTTGATG 585066 Query 281657 ATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 281716 | |||||| | ||||||||| ||||| | ||| || || || |||| ||| || | Sbjct 585065 AGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGGGAGAGGGGAGAGACGTCGAGG 585006 Query 281717 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 281776 || | | || ||| || ||| ||| | ||| ||||| || ||||| | |||| Sbjct 585005 AGAAGTAGATCCTGAGTCTTCTCAGAAGTGTCACCGGATAGAATCGCAGCTTGGACAGCA 584946 Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 ||||| || |||||||| ||||| || |||| | | || | | |||||||| || Sbjct 584945 GCACCGTAGGCAACAGCCTCATCGGGGTTAATGCTCTTGTTGGGCTCCTTACCATTAAAG 584886 Query 281837 AAATTTGA-AAGAAGTTGTC-TTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 281894 || | || | || ||| | ||| ||||||||||| ||| || || || | || | Sbjct 584885 AAGTCGGAGACGAGCTTGACGATAC--GAGGAATACGAGTTGAACCGCCGACAAGGACGA 584828 Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 281954 |||| ||||| | | ||||| | || ||||| | || || || || || || | Sbjct 584827 TTTCGTGCACATTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCGA 584768 Query 281955 GACCAGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGTG 282010 || ||| | || | |||| || ||||| ||||| ||| | ||||| |||| Sbjct 584767 GA-GTGCTACGGAAAAGGTCTTGGCAGAGTTCCTCGAAACGAGCACGTGTAAGGGAAGTG 584709 Query 282011 ACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 282069 || || ||||| || || |||| ||||| | ||| |||| || |||| | ||| Sbjct 584708 ----TAGAAGTCAATACCCTCATACAAGGAATCGATTTCGATCGAGGTCTGAGCGGCAGA 584653 Query 282070 AGATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 ||| | | ||| || |||||||| || || || Sbjct 584652 AGACAAAGTACGCTTGGCACGTTCGCAAGCGGT 584620 Score = 87.8 bits (96), Expect = 1e-11 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 |||||| | |||||| |||||||| |||| ||| ||||| || || ||| |||| | Sbjct 469811 CAAAAGGGAAACATCGAAAGTTCCACCTCCCAAATCGAAAATGAGGACGTTCTTTTCAGT 469870 Query 282325 GTCTTGGTTTTTA-TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 282383 | ||| || || ||||| || |||| ||| ||||||||||| ||||| || || | Sbjct 469871 TT-TTGATTGACGGTCGAGACCGTAAGCAATAGCGGCAGCAGTTGGCTCATTGATGATAC 469929 Query 282384 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 282443 | ||||| || ||||| || || || ||||| || || | || ||||| | Sbjct 469930 GGAGAACATCGAGGCCAGCGATAGCACCAGCGTCTTTTGTTGCCAAACGCTGGGAATCAT 469989 Query 282444 TAAAATATGCAGGAACA 282460 |||| || ||||| ||| Sbjct 469990 TAAAGTAGGCAGGTACA 470006 Score = 86.0 bits (94), Expect = 5e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 282720 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 282779 |||| | || || ||||| || || ||| | ||| || || || | ||||| || | Sbjct 583837 CTTGGTTCTTTGCGGCATCACCGATAAGACGCTCTCCGTCGGTGAAGGCGACATAGGAAG 583778 Query 282780 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACAC 282839 | || || || |||||||| ||||| ||||||||||||||| | | |||||||| |||| Sbjct 583777 GCGTCGTTCGGTTACCTTGGTCATTGGCAATAATTTCAACTCGATCGTTTTGCCACACAC 583718 Query 282840 CTACACAACT 282849 | ||||| || Sbjct 583717 CGACACACCT 583708 >seq23 Length=411388 Score = 176 bits (194), Expect = 3e-38 Identities = 462/694 (67%), Gaps = 16/694 (2%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||||||||||| ||||| | |||||| |||||||| | ||||| ||||| |||||| Sbjct 402714 TTATCAGCGGCAGAAACATTCAAAATACCGTTGGCATCGATGTCAAAGGTGACCTCAATT 402773 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCC-AGATTATT 281535 ||||| || || | ||||||||||||| || || | | ||||| || || Sbjct 402774 TGAGGTACACCACGGGGAGCAGGTGGGAT-ACTAGAAAGCTCGAACTTCCCAAGGAGGTT 402832 Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595 || || |||||| |||||||||||||| | |||||| || ||| ||| || Sbjct 402833 GTTGTCCTTAGTGCGAGCACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGTTGGTT 402892 Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 281655 ||| | ||||||| ||| | || || || || | || ||||| | | || Sbjct 402893 ATCAGCGTAAGTTGAAAAGGTTTCAGACTTCTTGATCGGGACAGTGGTGTTACGCTTGAT 402952 Query 281656 AATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 281715 |||||| | ||||||||| ||||| | ||| ||||| || |||| ||| || | Sbjct 402953 GGGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGAGAGAGGGGAGAGACGTCGAG 403012 Query 281716 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 281775 || | | || ||| || ||| ||| | ||| || || || ||||| | ||| Sbjct 403013 GAGAAGTAGATCCTGAGTCTTCTCAGAAGTGTCACCGGATAGGATCGCAGCTTGGACAGC 403072 Query 281776 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 281835 |||||| || |||||||| |||||||| || | | | || | | ||||||||||| Sbjct 403073 AGCACCGTAGGCAACAGCCTCATCAGGGTTGATGCTCTTGTTGGGCTCCTTACCATTGAA 403132 Query 281836 AAAATTTGA-AAGAAGTTGTC-TTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 281893 || | || | || ||| | ||| ||||||||||| || || || || | || Sbjct 403133 GAAGTCGGAGACGAGCTTGACGATAC--GAGGAATACGAGTCGAACCGCCGACAAGGACG 403190 Query 281894 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 281953 ||||| || || | | ||||| | || ||||| | || || || || || || Sbjct 403191 ATTTCGTGTACGTTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCG 403250 Query 281954 AGACCAGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGT 282009 ||| ||| | || | | | || ||||| ||||| || | ||||| ||| Sbjct 403251 AGA-GTGCTACGGAAAAGGCCCTGGCAGAGTTCCTCGAAACGGGCACGTGTAAGGGAAGT 403309 Query 282010 GACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAG 282068 | || || ||||| || || |||| ||||||| ||| |||| || |||| | || Sbjct 403310 G----TAGAAGTCAATACCCTCATACAAGGAATCAATTTCGATCGAGGTCTGAGCGGCAG 403365 Query 282069 AAGATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 |||||| | ||| || |||||||| || || || Sbjct 403366 AAGATAAAGTACGCTTGGCACGTTCGCAAGCAGT 403399 >seq224 Length=14514 Score = 165 bits (182), Expect = 6e-35 Identities = 456/692 (66%), Gaps = 13/692 (2%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||||||||||| ||||| | | |||| |||||||| | ||||| ||||| |||||| Sbjct 9520 TTATCAGCGGCAGAAACATTCAAACTACCGTTGGCATCGATGTCAAAGGTGACCTCAATT 9461 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| || || | ||||||||||||| || | | ||| | || || || Sbjct 9460 TGAGGTACACCACGGGGAGCAGGTGGGATACCAGAAAGCTCAAACTTCCCAAGGGGGTTG 9401 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || || |||||| |||||||||||||| | |||||| || ||| ||| ||| Sbjct 9400 TTGTCCTTAGTGCGAGCACGTTCACCCTCGAAGACTTGGATGAGCACACCAGGTTGGTTA 9341 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 281656 || | ||||||| || | || | || || | || ||||| | | || Sbjct 9340 TCGGCGTAAGTTGAGAAGGTTTCAGACTCCTTGGTCGGGACAGTGGTGTTACGCTTGATG 9281 Query 281657 ATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 281716 | |||||| | ||||||||| ||||| | ||| ||||| || |||| ||| || | Sbjct 9280 AGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGAGAGAGGGGAGAGACGTCGAGG 9221 Query 281717 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 281776 || | | || ||| || ||| ||| | ||| | ||| || ||||| | |||| Sbjct 9220 AGAAGTAGATCCTGAGTCTTCTCAGAAGTGTCACCGGATAAAATCGCAGCTTGGACAGCA 9161 Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 ||||| || |||||||| || ||||| || | | | || | | |||||||| || Sbjct 9160 GCACCGTAGGCAACAGCCTCGTCAGGGTTGATGCTCTTGTTGGGCTCCTTACCATTAAAG 9101 Query 281837 AAATTTGA-AAGAAGTTGTC-TTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 281894 || || || | || ||| | ||| ||||||| ||| ||| || || || | |||| Sbjct 9100 AAGTTGGAGACGAGCTTGACGATAC--GAGGAATATGAGTTGAACCGCCGACAAGGACAA 9043 Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 281954 |||| ||||| | | | ||| | || ||||| | || || || || || || | Sbjct 9042 TTTCGTGCACATTGGCCTCATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCGA 8983 Query 281955 GACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGTGA 282011 || | | || | ||| || | ||| ||||| || | ||||| |||| Sbjct 8982 GAGTACTACGGAAAAGGTCCTGGCAGAATTCCTCGAAACGGGCGCGTGTAAGGGAAGTG- 8924 Query 282012 CATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAA 282070 || || ||||| || || |||| ||||| | ||| |||| ||| |||| | |||| Sbjct 8923 ---TAGAAGTCAATACCCTCATACAAGGAATCGATTTCGATCGAAGTCTGAGCAGCAGAA 8867 Query 282071 GATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 |||| | ||| || |||||| | || || || Sbjct 8866 GATAAAGTACGCTT-GCACGTCCGCAAGCAGT 8836 >seq68 Length=203216 Score = 132 bits (146), Expect = 4e-25 Identities = 451/693 (65%), Gaps = 16/693 (2%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 |||||||| |||| |||| |||||| |||||||| | ||||| ||||| |||||| Sbjct 133335 TTATCAGCAGCAGAAACATCCGAAATACCGTTGGCATCGATGTCAAAGGTGACCTCAATT 133394 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| | || ||||||||||||| || | ||| | || || || Sbjct 133395 TGAGGTGCACCATGGGGAGCAGGTGGGATACCAGAAGGCTCAAACTTCCCAAGGAGGTTG 133454 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || || |||||| | |||||||||| ||| | |||||| || ||| ||| || Sbjct 133455 TTGTCCTTAGTGCAAGCACGTTCACCCTTGAAGACTTGGATGAGCACATCAGATTGGTTG 133514 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 281656 || | ||||||| || | || || || || | || ||||| | | || Sbjct 133515 TCGGCGTAAGTTGAGAAGGTTTCAGACTTCTTGGTCGGGACAGTGGTGTTACGCTTGATG 133574 Query 281657 ATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACT 281716 | |||||| | ||||||||| ||||| | ||| ||||| || |||| ||| || | Sbjct 133575 AGTGCGGTCATCACACCACCAGCAGTTTCAATACCGAGAGAGAGGGGAGAGACGTCGAGG 133634 Query 281717 AGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCA 281776 || | | || ||| | |||| ||| | ||| | ||| || ||||| | |||| Sbjct 133635 AGAAGTAGATCCTGAG--TCTTCAGAAGTGTCACCGGATAAAATCGCAGCTTGGACAGCA 133692 Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 ||||| || |||||||| || ||||| || | | | || | || |||||||| || Sbjct 133693 GCACCGTAGGCAACAGCCTCGTCAGGGTTGATGCTCTTGTTGGGCTTCTTACCATTAAAG 133752 Query 281837 AAATTTGAAAGAAG-TTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 281894 || | || | || ||| | ||| ||||||||||| ||| || || || |||| Sbjct 133753 AAGTCGGAGACGAGCTTGACGATACG--AGGAATACGAGTTGAACCGCCGACAGGGACAA 133810 Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 281954 |||| ||||| | | ||||| | || ||||| | || || || || || || | Sbjct 133811 TTTCGTGCACATTGGCCTTATCAATCTTGGAATCGCGAAGGACCTTCTCGACAGGATCGA 133870 Query 281955 GACCAGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG---AGTG 282010 || ||| | || | ||| || ||||| || || || ||||| |||| Sbjct 133871 GA-GTGCTACAGAAAAGGTCCTGGCAGAGTTCCTCAAAACAGGCATGTGTAAGGGAAGTG 133929 Query 282011 ACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 282069 || || ||||| || | |||| ||||||| ||| |||| || |||| | ||| Sbjct 133930 ----TAGAAGTCAATACCCTTATACAAGGAATCAATTTCGATCGAGGTCTGAGCGGCAGA 133985 Query 282070 AGATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 ||| | | | | || |||||||| || || || Sbjct 133986 AGAAAAAGTATGCTTGGCACGTTCGCAAGCAGT 134018 >seq133 Length=91674 Score = 86.0 bits (94), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 |||||||| || ||| | |||| || |||||||||||||| || ||| | ||||| || Sbjct 74901 GGTAAAGAGGGCCGTTTGCGAGGTAACTTGATGGGAAAGCGGGTTGATTTTTCTGCTCGA 74960 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||||| ||| | | | ||||||| || ||||||| || ||| Sbjct 74961 ACTGTGATTACTGGTGATCCCAATCTGGAATTGGATGAAGTCGGCGTTCCTCGCAGTATC 75020 Query 432408 GC 432409 || Sbjct 75021 GC 75022 >seq17 Length=493145 Score = 86.0 bits (94), Expect = 5e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || ||||||||||| || || || ||||| || |||||||| || | | | |||| Sbjct 409594 TTCTTGTCAAGACCATAGGCCAATGCGGCAGCCGTAGGTTCATTGATGACACGAAGAACA 409535 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 | |||||||||||| || || ||||| |||||||| | ||| | || || || || Sbjct 409534 TCAAGACCAGCAATCTGACCAGCGTCTTTCGTGGCTTGACGTTGGGCGTCATTGAAGTAG 409475 Query 282452 GCAGGAACAGTAATAACGGC 282471 ||||| || || || || || Sbjct 409474 GCAGGGACCGTGATGACAGC 409455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740613952915710