Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 4e-14 seq38 82.4 7e-11 >seq5 Length=946259 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 137208 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTG 137267 ||||| ||||| ||||| || ||||| || || | || | || || | || Sbjct 883607 ATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAACTG 883666 Query 137268 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 137327 || |||||| |||||| ||| || || |||||||| |||||||||||||| ||| || Sbjct 883667 CTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTT 883726 Query 137328 TTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 137387 | || | | || | ||||| | | || ||||||| ||| | |||||| ||||| Sbjct 883727 TGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGAGTGATCGTCTTTCCGGT 883786 Query 137388 CAATGTTTTTACGAATATTTGCAT 137411 |||||| || || || || ||||| Sbjct 883787 CAATGTCTTCACAAAGATCTGCAT 883810 >seq38 Length=308705 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||| |||| ||| | ||| | |||| || || || || || |||||||| || Sbjct 188851 GCCTCCACGTAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGA 188792 Query 137244 CATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 137302 | |||| || | |||||||| || || || || |||| || ||||| |||||||||| Sbjct 188791 AAGGGTGCGTCCA-TCTTCGAGCTGCTTGCCGGCGAAGATTAGTCGTTGTTGATCGGGAG 188733 Query 137303 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTA 137362 | ||||| || || || || || || | | || | |||||||| | || | Sbjct 188732 GAATGCCCTCCTTATCCTGTATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGA 188673 Query 137363 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 | || | ||| | ||| ||||| || | || || || || |||||||| Sbjct 188672 CCTCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACAAAGATTTGCAT 188624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488541954222000