Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq38 104 2e-17 >seq38 Length=308705 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | || || | || |||| |||||| || ||||| Sbjct 189271 CTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAA 189212 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||| | | | Sbjct 189211 AATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTTACATT 189152 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| ||| || ||||||| || ||||| || || || | || || || Sbjct 189151 GTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTTCCTGTGAGGGTCTTGAC 189092 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 189091 GAAGATCTGCAT 189080 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | ||| || | || || |||||||| || || || Sbjct 188815 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCGAGCTGCTTGCCGGCGAA 188756 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || || || || | ||||| || |||||| ||| ||||| ||||| || Sbjct 188755 GATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTGTATCTTGGCCTTCAC-GT 188697 Query 35665 TGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||||| ||||||||||| ||||| | || || | Sbjct 188696 TGTCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAA 188637 Query 35724 CAAATATCTGCAT 35736 |||| || ||||| Sbjct 188636 CAAAGATTTGCAT 188624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791712301800