Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq34 93.3 5e-14 >seq34 Length=329079 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 111887 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 111946 |||||||| | ||| || || || || || | ||||||||| |||||| || || Sbjct 277216 TAGATACCTTCGATAGAATCATCTTTCATGCAAACAAGGAAGCATGAGGACATTTGAGGC 277157 Query 111947 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACAT 112005 || ||||| ||||||||||| || || || || ||| |||| ||| | | |||||| Sbjct 277156 GAAGGGGTACCGGCATTGAAGAGAGTGGGAGTGGCATGAGTGAA-ATATCGCTCGGACAT 277098 Query 112006 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCG 112065 || |||||| ||||||| || || || || ||||| || || | |||||||| Sbjct 277097 GAGGTTGTATGTTCGCAAGACATGCTCGATATCGTCTCCGTGTATCCCAACAGCGACCCG 277038 Query 112066 CATGAACATGTACTGTGG 112083 ||||| ||| | ||||| Sbjct 277037 CATGATCATATGTTGTGG 277020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029370116000