Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08]
335 sequences; 41,818,685 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq47 132 5e-26
seq48 82.4 8e-11
>seq47
Length=266373
Score = 132 bits (146), Expect = 5e-26
Identities = 282/416 (68%), Gaps = 9/416 (2%)
Strand=Plus/Plus
Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828
|| ||||| | || || | || || || |||| | ||||||||| | ||||||||||
Sbjct 37947 CCCTCATCACGACTGATGAGCTCGTTTGAGAACGCCAAGCCAGGCATTAATCCACGCTTC 38006
Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888
|||| ||||||||||| |||||| ||| |||||| |||||||| ||| ||||||
Sbjct 38007 TTCATCCAAAAGATGGACGCGAAGGAGCCAGAGAAGAAAATGCCTTCAACAGCAGCAAAG 38066
Query 74889 GCGACAAGGCGTTGCGCGAA---CG-GTGCATCGGAAGTCATCCAAGTCTGAGCCCATTC 74944
|| || || || | |||| || ||| ||| | | ||||| | ||||||| ||
Sbjct 38067 GCTACGAGACGCTCGCCGAAAACCGAGTG-TTCGTCACTGATCCAGCGCAGAGCCCACTC 38125
Query 74945 AGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTC 75004
|| || || |||| ||| | ||| ||||| || | || ||| | || |
Sbjct 38126 GGCCTTGCGCTTGATGCAAGGAATAGTCTCGATAGCATCAAAAAGGAAATCACGTTCGAC 38185
Query 75005 GGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTT 75064
|| || |||| | |||| || | ||| ||||| ||||| || ||||| ||| |
Sbjct 38186 AGGGTCTTTGATGTATGTGTCGATGAGAAGAGAGTAAGTCTCGGAGTGAATGTTCTCCAT 38245
Query 75065 GAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAA--A 75122
| |||| || ||||||| | || ||||| || | |||||| || || || ||
Sbjct 38246 CATAATCTGGAACCCGTAGAAGCAACGTGCCTCAGCGACCTGTACTTCGTTCGAGAAGCG 38305
Query 75123 TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178
||| | | |||||| |||| ||||| || |||||||| || || || || ||
Sbjct 38306 TTC--GAGAAGATTCTCGTTGACAATGCCATCAGAGGCGGCAAAGAACGCGAGAAC 38359
>seq48
Length=263890
Score = 82.4 bits (90), Expect = 8e-11
Identities = 284/439 (65%), Gaps = 7/439 (2%)
Strand=Plus/Minus
Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828
|||||||||| ||| || | || || ||| | | ||||||||||| || || ||||||
Sbjct 116791 CCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAGGCCAGGCATCAGGCCGCGCTTC 116732
Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888
|| ||||| || |||| | ||| || ||| || ||||| || |||||| || ||
Sbjct 116731 TTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAAGATTCCCTCGACAGCAGCGAAT 116672
Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTC 74944
|| || | | | || || |||| ||| ||| ||||| | | ||||| ||
Sbjct 116671 GCCACCAATCTCTCTGC-AAAAGTGCTTCGTTTGTCAGATATCCATTTGAGGGCCCAGTC 116613
Query 74945 AGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTT 75003
||||| || |||| ||| || | || || || || | |||||| ||| | |
Sbjct 116612 GGCTTTGCGCTTGA-TGCACGGTATTGTTTCTATTGCGTCGAAGAGATATGCGCGTTGAT 116554
Query 75004 CGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGT 75063
||||||||||| | || || | || ||||| || || ||||||| ||
Sbjct 116553 TAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTAAGTTTCAGAATGAACGTTTTCCA 116494
Query 75064 TGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAAT 75123
| | ||| || | || || | |||||||| || || || || ||||||||
Sbjct 116493 TCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGCTGCTTGCACTTCGTTTGAAAAGC 116434
Query 75124 TCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTT 75183
| | ||| || | ||||| ||||| |||||||| || || || || ||
Sbjct 116433 GCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGCGGCAAAGAATGCAAGGACGTGGG 116374
Query 75184 TGATAAAGTGGCGCTCATC 75202
|||| || || ||||| ||
Sbjct 116373 TGATGAAATGACGCTCGTC 116355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547213708533000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |