Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 1e-12 >seq5 Length=946259 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 34497 CACCAA-ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTT 34555 |||||| ||| || || ||| || ||||||||||| || ||||| || || | || | Sbjct 883600 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 883659 Query 34556 CAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTG 34615 | | || || || ||||| || |||||||||||||| || || | || || ||||| Sbjct 883660 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTC-C 883718 Query 34616 TGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTT 34674 ||| |||| || || | || ||||| ||| ||||| | || ||||| Sbjct 883719 TGAATCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGAGTGATCGTC 883778 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| || || |||||||| |||||||| Sbjct 883779 TTTCCGGTCAATGTCTTCACAAAGATCTGCAT 883810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728315018055