Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F001700625.1_202016-08-08] 335 sequences; 41,818,685 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq135 87.8 1e-12 >seq135 Length=87882 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 27492 GTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 |||| |||||||||| |||||||| ||||||||||| || ||||| || |||| || || Sbjct 54983 GTCCTTGTACTCTGCGCCGAAATGTCTCCATTGGAATCCATACACAGGACCCAAATCCCC 55042 Query 27552 CTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCA 27611 || ||| ||| | | || | ||||| ||| || | |||||||| | ||||| Sbjct 55043 TTCACGCCTATGCCCAAGTCCACGGCCTTCCAAGAAGGCTTTCGAACCGTTTCCATCCCA 55102 Query 27612 GATCTTTACCCCCTTCT-CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACA 27670 ||||| || || |||| || || || |||| | || | || ||||||||| | Sbjct 55103 TATCTTGACGCCTTTCTGCGACAAGATC-GTGGAATCGGTACAGCCATGGACGAACCAGA 55161 Query 27671 GCAGCTCCTC 27680 |||| || || Sbjct 55162 GCAGTTCTTC 55171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369505691371385