Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq886 104 5e-17 >seq886 Length=61200 Score = 104 bits (114), Expect = 5e-17 Identities = 152/210 (72%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 230428 GACGCTATTCCATGTCGCCTT-ATTGGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486 ||||| |||| ||| ||| || || |||||||| | | ||| | || || ||||| Sbjct 12654 GACGCGCTTCC-TGTAAGCTTGATCGGTATGAACGCAACATTGATGTGTCAATATATCGA 12712 Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAA 230546 || || ||||| || | | || || || || || |||| |||||||||| | ||| Sbjct 12713 GTTTGTTGCCGATCGACTACTCGTCGCTCTCGGCAACAAGAAGTTGTACAACTCGACGAA 12772 Query 230547 CCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCG 230606 |||||| | |||||||| | || ||||| ||||||||||| ||||| || || ||||| Sbjct 12773 CCCCTTCGACTTTATGGACATGATCTCGCTCCAAGGGAAGACAAACTTTTTTGAGAAGCG 12832 Query 230607 TGTCAGTGACTA-TCAGAGGCCTGGTGTGA 230635 || || || ||| ||| ||||||||| Sbjct 12833 GGTGTCCGATTACTCAAAGG-CTGGTGTGA 12861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057782757095090