Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2556 163 3e-35 seq1520 147 2e-30 >seq2556 Length=115598 Score = 163 bits (180), Expect = 3e-35 Identities = 297/432 (69%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||||||||| ||| ||||| ||||| |||| |||||| || ||||| ||| ||||| Sbjct 98483 AGACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTT 98542 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| || || |||||||||||||| || | ||| || ||||| ||||| Sbjct 98543 AGGCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAA 98602 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATC-TTTATT 16377 || || ||||| |||| || || || | |||| || || | || || || ||| | Sbjct 98603 AAGATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGT-GCTTCGTTTGTC 98661 Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437 | |||||||| | |||| |||||||| | || || || || |||||||| || Sbjct 98662 AGATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGC 98721 Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 | || | | | || | || ||| | | || ||||| || || | | ||| Sbjct 98722 GTCGAAGAGATATGCGCGTTGATTAAGATCCTTGACGTATGTATCGATAAGCAGAGAGTA 98781 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 |||| || || | ||| || || ||| || || ||||| ||| | || ||||| || Sbjct 98782 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 98841 Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 | ||| ||||| |||| || ||| ||| || || ||||||||||||||| || Sbjct 98842 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 98901 Query 16618 AGCAAAAAACGC 16629 ||||| || || Sbjct 98902 GGCAAAGAATGC 98913 >seq1520 Length=48961 Score = 147 bits (162), Expect = 2e-30 Identities = 305/443 (69%), Gaps = 12/443 (3%) Strand=Plus/Plus Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252 || || || || || |||||| || | |||||| || | ||||||||||||||| ||| Sbjct 6181 AAGATAAGGCATGCAAAGTCGGTGTGCATTCCTTCATCACGGCTGATAAGTTCGTTTGAA 6240 Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCA-GCAAATGACCC 16311 || || ||||| |||| | ||| ||||| || | ||| ||||| ||| || || || || Sbjct 6241 AAGGTCAACCCAGGCAATAATCCACGTTTTTTGATCCAAAATAT-GCACGCGAAAGATCC 6299 Query 16312 CGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATC 16371 || || || || || || | | || || || | | ||||||||| ||||| | | Sbjct 6300 GGAGAAAAAAATTCCTTCGATGGCTGAGAATGCAACGAGTCGTTCCGCAAACGTAACTTG 6359 Query 16372 TTTAT-TACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTT 16430 | | | || |||||| | || ||||| | ||||||||||| || ||| ||||||| Sbjct 6360 ATCGTCTTCG-ATCCATCTTAGTGCCCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTT 6418 Query 16431 CTATGGCCTTAAACAATTTCTCTTTTTCCTGAA--TATCGATTATATACGTATCAATCAG 16488 | || | | ||||| | ||| ||| ||| |||||||| | |||||| Sbjct 6419 CGATAGAACTGAACAAGAATGATCGTTC--GAAGGGATCTTGGATATACGTTTGAATCAG 6476 Query 16489 TAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCG 16548 ||| ||| ||||||| || ||||| || || | ||| |||||||||||| |||| Sbjct 6477 CAAAGAGTAAGTTTCTGAATGGATGTTTTCCATCATTGACTGGAATCCATAGAAGGATCG 6536 Query 16549 AGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCG--CCAGGTTCTCATTCACGATA 16606 |||||| || | || | || ||| || | || || || ||| || || || ||| Sbjct 6537 AGCCTCAGCGACCTG-AATTTCAC-TAGAGAAGTGACGGATCAAGTTTTCGTTTACAATA 6594 Query 16607 CCGTCACTTGCAGCAAAAAACGC 16629 ||||| ||||| ||||| || Sbjct 6595 CCGTCGGACGCAGCGAAAAATGC 6617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511394947074760