Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq886 239 5e-58 seq2556 192 6e-44 seq2933 114 1e-20 >seq886 Length=61200 Score = 239 bits (264), Expect = 5e-58 Identities = 401/573 (70%), Gaps = 13/573 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | || ||| |||| | Sbjct 11950 ATATGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAAGAGATGGATTTA 12009 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || || ||| |||||| | ||| |||| |||| ||| || |||||| Sbjct 12010 TCAAAAGACCTTCATGACTGGAACAACCGCCTGAATGACAGCGAACGATTCTTCATCTCC 12069 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | || || || || || |||||| || ||||| || ||||||||||| |||| || Sbjct 12070 CGTGTCCTCGCGTTCTTTGCCGCCTCTGATGGCATTGTTAACGAGAATCTTCTCGAACGC 12129 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | || || ||||| || ||||| || ||||||||||| || ||||| ||| Sbjct 12130 TTCTCGAACGAAGTACAGGTCGCTGAGGCACGTTGCTTCTACGGGTTCCAGATTATGATG 12189 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTC 116928 |||||| | ||||| || | || || ||||||||||| ||| | | | || Sbjct 12190 GAGAACATTCACTCTGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCTGTC 12249 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | | | | ||| || ||| | || |||||||| || || ||| |||| ||||| Sbjct 12250 GAACGTG-ATTTCC--TTTTTG-ATGCTATCGAGACCATTCCTTGCATCAAGCGCAAGGC 12305 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAG-AGGCCGCCTTCGGCGAGCGCCTGGTGG 117047 ||||||||| |||||||||||| | ||| | | | ||||||||||| || || | Sbjct 12306 CGAGTGGGCTCTGCGCTGGATC-AGTGATGAGCACTCGGTTTTCGGCGAGCGTCTCGTAG 12364 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 |||| || || || || ||| | ||||| || ||| ||||| |||| |||||| | | Sbjct 12365 CCTTTGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATGA 12424 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || || | ||||| ||| || | ||| |||||||||||| | || |||| Sbjct 12425 AGAAGCGTGGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAGG 12484 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200 || ||||| |||||| ||||| | || |||| Sbjct 12485 GTATGCATACCGACTTCGCCTGCCTTCTTTTCA 12517 >seq2556 Length=115598 Score = 192 bits (212), Expect = 6e-44 Identities = 384/561 (68%), Gaps = 15/561 (3%) Strand=Plus/Minus Query 116639 TGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCC 116698 |||| |||||||| || || || || |||||||||||| || ||| | ||||| | Sbjct 99039 TGGCAGATGTACAAGAAAGCAGAAGCATCGTTCTGGACCTCGGAAGAGATTGACCTCACT 98980 Query 116699 AAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 | || ||||||| ||||| || ||| | ||||||| |||||||||| || Sbjct 98979 CATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCATTTCATCACCCAT 98920 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 || || || || || |||||| ||||| ||||| ||||| |||||| | ||||| || Sbjct 98919 GTCCTTGCATTCTTTGCCGCCTCTGACGGTATCGTGAACGAAAATCTGTTGGAGCGCTTT 98860 Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAG 116875 | | || ||||| | || |||||||| | ||| || || || || || ||||| Sbjct 98859 TCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCAAATAATGATGGAA 98800 Query 116876 AACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCGGAGG 116933 ||||| || || |||| || || || ||||| || ||||| | |||| | Sbjct 98799 AACGTTCATTCTGAAACTTACTCTCTGCTTATCGATACATACGTCAAGGATCTT---AAT 98743 Query 116934 AGAAGCTC-CGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAG 116992 | || | | | || |||| || || || || |||||| |||| || ||||| Sbjct 98742 CAACGCGCATATCTCTTCGACGCAATAGAAACAATACCGTGCATCAAGCGCAAAGCCGAC 98683 Query 116993 TGGGCGCTGCGCTGGATCGCCGGCAGA-GAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTT 117051 ||||| || ||||| | | || | || | | | || | ||| | ||||||| || Sbjct 98682 TGGGCCCTCAAATGGATATCTGACAAACGAAG-CACTTTTGCAGAGAGATTGGTGGCATT 98624 Query 117052 CGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAA 117111 ||| || |||||||| |||| ||||| || ||||| |||| || ||| | ||||| Sbjct 98623 CGCTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCTTCCATTTTCTGGTTAAAGAA 98564 Query 117112 ACGCGGCCTCATGCCCGGCCTGACT--TTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 |||||||| ||||| ||||| ||| |||| |||||||||||| | | || || ||| Sbjct 98563 GCGCGGCCTGATGCCTGGCCTAACTTATTCA--AACGAGCTCATCAGCCGAGATGAAGGT 98506 Query 117170 CTGCATTGCGACTTTGCCTGT 117190 | ||| ||| || || ||| Sbjct 98505 TTACATACCGATTTCGCGTGT 98485 >seq2933 Length=244213 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || |||||||||||||| ||||| | || ||||| | | Sbjct 207376 ATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTCA 207435 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | || || |||||||| || | || || Sbjct 207436 GACACGATCGACAACG-TGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCA 207494 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| |||| ||| ||||| ||||| || || | |||||||| |||||||| Sbjct 207495 ACAACGACTAATCTTCGCTGGCAAGCAGCTCGAAGATGGACGCACCCTTTCTGACTACAA 207554 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || || || || || Sbjct 207555 CATTCAGAAGGAGTCAACCCTTCACCTTGT 207584 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || || || | || || || | | Sbjct 207832 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACGATTACTCTGGAGGTTGAGTCGTCG 207891 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| |||||||| || | |||||| Sbjct 207892 GACACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCAG 207951 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | || ||||| ||| |||| || | ||||| || ||| |||||| Sbjct 207952 CAGCGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCCGATTACAAC 208011 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||||| | || || || || Sbjct 208012 ATCCAGAAGGAGTCGACTCTTCACCT 208037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515199602349680