Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 >seq1 Length=474241 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| | || || || || || || | ||| | || | Sbjct 254141 AATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTGGAGTCGTC 254200 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || || ||||| ||||| || ||||| || ||||| || Sbjct 254201 TGATACCATTGACAATGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCA 254260 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | ||||| ||||| ||||| || |||| ||| | || || | |||||||| Sbjct 254261 ACAACGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAA 254320 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| ||||||||||| ||| | ||| | ||| | ||| | || ||||| || Sbjct 254321 TATCCAAAAAGAATCGACTCTTCATCTTGTTCTCCGTCTTCGTGGTGGGAT 254371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755427264342400