Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2933 114 1e-20 seq1 111 1e-19 seq2786 95.1 1e-14 seq1017 91.5 1e-13 >seq2933 Length=244213 Score = 114 bits (126), Expect = 1e-20 Identities = 148/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| || | ||||| ||| |||||||| || ||| Sbjct 207572 GTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCGAGCTGCTTGCCA 207513 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGTTT 118660 ||| |||| || || || ||||||||||| ||||||||||| | |||| || || || Sbjct 207512 GCGAAGATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTGT-ATCTTGGCCTT 207454 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | |||| ||||| | ||||||||| | || | ||||||||| || || || Sbjct 207453 CACGTTGTCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTTGCCCGTGAGGGT 207394 Query 118721 TTTTACAAAAATCTGCATGGCT 118742 || ||||| || |||||| || Sbjct 207393 CTTAACAAAGATTTGCATGCCT 207372 Score = 107 bits (118), Expect = 2e-18 Identities = 151/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 118529 CACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCT 118587 ||||||| || | || ||||| || || |||||||||||| | ||||| ||||| Sbjct 208042 CACCAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCT 207983 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | | ||| || ||||| | |||||||||||||| || || || |||||||||||||| Sbjct 207982 CCAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCT 207923 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || | || | |||||||| ||| ||||| | || | ||| | Sbjct 207922 GGATCTTCGCCTTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCT 207863 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || || || |||||||| Sbjct 207862 TGCCTGTGAGGGTCTTGACGAAGATCTGCAT 207832 >seq1 Length=474241 Score = 111 bits (122), Expect = 1e-19 Identities = 152/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 118529 CACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCT 118587 ||||||| || | ||||||||||| |||||||| || || | || || ||||| Sbjct 254580 CACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCT 254521 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | | ||| |||||||| |||| | |||||| || |||||||| ||||| || ||||| Sbjct 254520 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCT 254461 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| ||| || || | |||| ||||| | ||||||||| | || | ||| | Sbjct 254460 GAATCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCT 254401 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||||||| || || ||||| |||||||| Sbjct 254400 TTCCGGTCAATGTCTTCACAAAGATCTGCAT 254370 >seq2786 Length=9315 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 118529 CACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCT 118587 ||||||| || | || | ||| || ||||| ||||||||| | ||||| ||||| Sbjct 1528 CACCAAGGTGAAGAGTCGGCTCCTTCTGAATATTGTAATCGGGC---GTGCGACCATCCT 1584 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | | ||| || ||||| | |||||||||||||| || || || || ||||||||||| Sbjct 1585 CCAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCT 1644 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||||| || || | || | |||||||| ||| ||||| | || | || | Sbjct 1645 GGATTTTCGCCTTTACATTGTCAATGGTGTCCGACAACTCAACCTCCAGAGTAATCGCCT 1704 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 | || || || || || || || ||||||||| || Sbjct 1705 TTCCTGTGAGGGTCTTGACGAAGATCTGCATGCCT 1739 >seq1017 Length=59083 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| ||||| | || || ||||| |||||||||||||| |||| ||| || ||| Sbjct 44517 CAGCACTAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCACTCAGAGTACGTCCATC 44576 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 ||| || |||||||||||| | ||||| ||||| ||||| || || || Sbjct 44577 CTCAAGTTGTTTTCCAGCGAAAATGAGTCGCTGTTGATCAGGGGGAAT 44624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433814310721756