Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2933 120 2e-22 seq1 98.7 6e-16 seq2786 86.0 4e-12 >seq2933 Length=244213 Score = 120 bits (132), Expect = 2e-22 Identities = 154/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 34180 CACCA-GGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGT 34238 ||||| |||| | ||| || ||||| |||||||| ||||| ||| || | || | Sbjct 208042 CACCAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCT 207983 Query 34239 CCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGG 34298 ||||||||||||| || |||||||| ||||||||||| || | || ||||||||| Sbjct 207982 CCAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCT 207923 Query 34299 CTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTT 34358 ||||| ||||| || | | || | || | ||| || || |||| || || || | Sbjct 207922 GGATCTTCGCCTTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCT 207863 Query 34359 TGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || || || ||||||||||| Sbjct 207862 TGCCTGTGAGGGTCTTGACGAAGATCTGCAT 207832 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || || | || || | ||||||||| ||||| Sbjct 207566 TCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGTCCATCTTCGAGCTGCTTGCCAGCGAAG 207507 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || || || || ||| || | || |||||| || |||||| ||| | | | Sbjct 207506 ATTAGTCGTTGTTGATCGGGAGGAATGCCCTCCTTATCCTGTATCTTGGCCTTCACGTTG 207447 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || ||||| |||| ||||| |||||||| ||||| || || ||| Sbjct 207446 TCGATCGTGTCTGAAGACTCGACCTCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACA 207387 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 207386 AAGATTTGCAT 207376 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| || ||||| || || ||| || | || |||||||||||||| || ||| Sbjct 207794 TCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAA 207735 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| || || ||||| || | | |||||||| || || ||| | || | Sbjct 207734 ATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCCTTGACATTG 207675 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | ||| ||||| || | ||||| || || || ||||| || || || Sbjct 207674 TCAATAGTGTCAGACGACTCGACCTCAAGAGTGATCGTCTTTCCCGTGAGTGTCTTGACG 207615 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 207614 AAGATCTGCAT 207604 >seq1 Length=474241 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| ||||| ||||| || ||| ||| | || ||||||||||| || || || Sbjct 254560 TCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAACTGCTTTCCAGCAAAG 254501 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | ||||| |||||| || | || || ||||| |||||| ||| | || | Sbjct 254500 ATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCCTTGACATTG 254441 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || ||||| || | ||||| || || ||||| | || |||||| Sbjct 254440 TCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTCCGGTCAATGTCTTCACA 254381 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 254380 AAGATCTGCATC 254369 >seq2786 Length=9315 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 34180 CACCA-GGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGT 34238 ||||| |||| | ||| || ||||| || ||||| |||| | ||| | || | Sbjct 1528 CACCAAGGTGAAGAGTCGGCTCCTTCTGAATATTGTAATCGGGCGTGCGAC---CATCCT 1584 Query 34239 CCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCG 34297 ||||||||||||| || |||||||| ||||||||||| | |||| | | ||||||||| Sbjct 1585 CCAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGG-ATACCCTCCTTGTCC 1643 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 || || ||||| || | | || | || | | | || || |||| || || | Sbjct 1644 TGGATTTTCGCCTTTACATTGTCAATGGTGTCCGACAACTCAACCTCCAGAGTAATCGCC 1703 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || ||||| || || || ||||||||||| Sbjct 1704 TTTCCTGTGAGGGTCTTGACGAAGATCTGCAT 1735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323060018370080