Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq2440 170 2e-37 >seq2440 Length=22844 Score = 170 bits (188), Expect = 2e-37 Identities = 383/570 (67%), Gaps = 9/570 (2%) Strand=Plus/Minus Query 16225 AAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGA 16284 ||||| || ||| || || || |||| ||| || || | ||| || | || ||||| Sbjct 14540 AAACAGTAAACAGGCGAAGTCGGTGTGCATTCCCTCATCACGACTGATGAGTTCATTTGA 14481 Query 16285 AAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACC 16344 ||| | |||||| ||||| || || | ||| || | ||| || || ||||||||||||| Sbjct 14480 AAACGAAAGACCAGGCATAAGCCCCCTTTTCTTCAACCAGAAGATTGCGGCAAATGAACT 14421 Query 16345 AGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtt 16404 ||| || || | || ||||| || |||||||| || | || || | |||| ||| Sbjct 14420 AGAGAAAAAGAGTCCCTCAACAGCTGCAAATGCGACGAGCCGTTCCGCAAACGTATGATT 14361 Query 16405 tttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTC 16464 || |||||||| |||||| ||||||| | || | | ||| | || Sbjct 14360 GGCCGAATCGATCCATTTCAAAGCCCATGTTGCTTTATTGGCAATAGAAGGGATGGTTTC 14301 Query 16465 TATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAA 16524 || || |||||| | |||| || || | | | |||||| || | || || || Sbjct 14300 GATGGCGGAAAATAAGTGGTTTTGTTGTTCGGTGTTGGGAATATAGGTTTGGATAAGCAA 14241 Query 16525 ACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGC 16584 | |||||| || ||||||||||| ||||| || ||||| || || || || | ||| Sbjct 14240 AGAATACATCTCCGAATGAATATTTTCCATCATGATTTGAAAGCCGTAGAAACAACGAGC 14181 Query 16585 TTCGGATATTTGTACTTCAGAGTAAAACCTTTCTG--CTAAGTTTTCGTTAACTATTCCA 16642 ||| | | || || || ||| |||| || ||| |||||||||| || || || || Sbjct 14180 TTCAGGAAGTTTAACCTCGGAGCAAAA--TTGCTGTACTAAGTTTTCATTGACAATACCG 14123 Query 16643 TCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAA---AtttttttCGTTATCTGAA 16699 || || ||||| ||||||| | | || || | || || |||| ||| Sbjct 14122 TCCGCCGCAGCAAAGAACGCAATAACACGACAAACGAAGTGACGTTCATCATTAT-TGAG 14064 Query 16700 AGTTTTA-ACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGA 16758 || | || |||||| ||||| || | ||| || ||||| || ||||||||||| Sbjct 14063 AGCTGTATTCCAGTCCTTGTTGTCTTTGGAGAGATCCACTTCTTCCACTGTCCAAAAAGA 14004 Query 16759 AGCAACAGCCTTTTTATACATTTTCCATAT 16788 || ||||||||||| |||| || ||| || Sbjct 14003 TGCCACAGCCTTTTTGTACAGTTCCCAAAT 13974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462494407199800