Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 seq2933 91.5 1e-13 seq2786 91.5 1e-13 >seq1 Length=474241 Score = 100 bits (110), Expect = 2e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 45128 ACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 |||||| || || || ||| ||||||||||| ||||| || ||| | || || Sbjct 254579 ACCAAGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTC 254520 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || ||||| || || ||||| ||||||||||||||||| | || || |||||| Sbjct 254519 CAACTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTG 254460 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 ||| ||| ||| || | | |||| | ||| ||||| | || |||||||| Sbjct 254459 AATCTTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTT 254400 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||||||||||| ||||| Sbjct 254399 TCCGGTCAATGTCTTCACAAAGATCTGCAT 254370 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241 || || || || ||||| || || || | || |||||||| ||||| | ||||||||| Sbjct 254296 TCTTCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTA 254237 Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301 ||| ||| ||| ||| || | | | | || ||||||||||| ||| || Sbjct 254236 TCCTGAATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCACCTCCAAGGTGATG 254177 Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || |||| |||||| |||||||| ||||| Sbjct 254176 GTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 254142 >seq2933 Length=244213 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 45128 ACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 |||||| || || || ||||||||| |||||||| ||| || |||| | || || Sbjct 208041 ACCAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTC 207982 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || || || || || || | ||||| ||||| || || | |||||||||||| Sbjct 207981 CAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTG 207922 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| || | | | ||||| ||| ||||||| ||||||||||| Sbjct 207921 GATCTTCGCCTTTACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTT 207862 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| || || ||||| || ||||| ||||| Sbjct 207861 GCCTGTGAGGGTCTTGACGAAGATCTGCAT 207832 >seq2786 Length=9315 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45128 ACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 |||||| || || || |||||||||||| ||||| ||| | || |||| | || || Sbjct 1529 ACCAAGGTGAAGAGTCGGCTCCTTCTGAATATTGTAATCGGGC-GT--GCGACCATCCTC 1585 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || || || || || || | ||||| ||||| || || | ||||||||||||| Sbjct 1586 CAACTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTG 1645 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 ||||| ||| || | | | ||||| ||| ||||||| ||||||| ||| Sbjct 1646 GATTTTCGCCTTTACATTGTCAATGGTGTCCGACAACTCAACCTCCAGAGTAATCGCCTT 1705 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || ||||| || ||||| |||||| Sbjct 1706 TCCTGTGAGGGTCTTGACGAAGATCTGCATG 1736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395060548018903