Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq2556 140 3e-28 seq1520 116 4e-21 >seq2556 Length=115598 Score = 140 bits (154), Expect = 3e-28 Identities = 294/432 (68%), Gaps = 6/432 (1%) Strand=Plus/Plus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 |||||| ||||| ||| | || ||||||| || || || ||||||||| | |||| Sbjct 98485 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 98544 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322 || ||||||| || || || |||||||| || || | |||||| || || ||||| || Sbjct 98545 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 98604 Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT-TTTGTTCG 14381 |||||||| || ||||| || || | |||| ||| |||| | ||||| ||||| | Sbjct 98605 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAG-TGCTTCGTTTGTCAG 98663 Query 14382 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14441 |||||||||| ||||| || | ||| || || | |||||||| || || | Sbjct 98664 ATATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGT 98723 Query 14442 TAAATAAATGTTC-CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATA 14499 || | || | | | | || || | |||| | ||||||||| ||||| | || Sbjct 98724 CGAAGAGATATGCGCGTTGATTAAGATCCTTG--ACGTATGTATCGATAAGCAGAGAGTA 98781 Query 14500 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14559 ||||||| || | ||||||||| ||| || || |||||||| | | || || | Sbjct 98782 AGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAGC 98841 Query 14560 CCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14619 ||| || || |||| | || || |||||| || || ||||| ||| || Sbjct 98842 TGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGGC 98901 Query 14620 TGCAAAAAATGC 14631 ||||| ||||| Sbjct 98902 GGCAAAGAATGC 98913 >seq1520 Length=48961 Score = 116 bits (128), Expect = 4e-21 Identities = 233/337 (69%), Gaps = 10/337 (3%) Strand=Plus/Plus Query 14225 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 14284 || ||||| | || ||||||||||||||||| || || || |||| ||||| |||||| Sbjct 6211 CCTTCATCACGGCTGATAAGTTCGTTTGAAAAGGTCAACCCAGGCAATAATCCACGTTTT 6270 Query 14285 tttAACCAAAATATTGCA-GCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 || | |||||||| |||| ||||| |||||||| || || ||||| || | || | || Sbjct 6271 TTGATCCAAAATA-TGCACGCGAAAGATCCGGAGAAAAAAATTCCTTCGATGGCTGAGAA 6329 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTT--TTTTGTTCGATATCCATTTTCTAGCCCAT 14401 || | | |||||| |||||| ||| | | |||| |||||| || |||||| Sbjct 6330 TGCAACGAGTCGTTCCGCAAACGTAACTTGATCGTCTTCG--ATCCATCTTAGTGCCCAT 6387 Query 14402 TCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA--AATGTTCCTTCT 14459 | | ||||| |||||| || || ||||| |||| | | || | |||| || ||| Sbjct 6388 GCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGAACTGAACAAGAATGATCGTTC- 6446 Query 14460 CTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTT 14519 | |||| || || || | ||| || || || |||| || || ||||||| Sbjct 6447 GAAGGGATCTTG-GATATACGTTTGAATCAGCAAAGAGTAAGTTTCTGAATGGATGTTTT 6505 Query 14520 CCATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14556 |||| | ||| || ||||| || ||| ||| || Sbjct 6506 CCATCATTGACTGGAATCCATAGAAGGATCGAGCCTC 6542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482327252779240