Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2933 84.2 2e-11 >seq2933 Length=244213 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| ||||| | ||| || | |||||| ||||| || || |||||||||||||| | Sbjct 207602 CCTCCACGTAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAA 207543 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||| | || ||||| || |||| |||| ||||||||| || Sbjct 207542 AGGGTGCGTCCATCTTCGAGCTGCTTGCCAGCGAAGATTAGTCGTTGTTGATCGGGAGGA 207483 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTG--CTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||| |||||||| | | | ||| ||| || | | | ||||| | |||| Sbjct 207482 ATGCCCTCCTTATC--CTGTATCTTGGCCTTCACGTTGTCGATCGTGTCTGAAGACTCGA 207425 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||| ||||||| || | || || ||||| |||||||| Sbjct 207424 CCTCCAAAGTGATCGTTTTGCCCGTGAGGGTCTTAACAAAGATTTGCAT 207376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379329931435035