Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2556 192 5e-44 seq2933 120 3e-22 seq886 120 3e-22 seq777 111 1e-19 seq1379 107 2e-18 seq2786 102 7e-17 seq1 100 3e-16 >seq2556 Length=115598 Score = 192 bits (212), Expect = 5e-44 Identities = 453/673 (67%), Gaps = 41/673 (6%) Strand=Plus/Minus Query 57560 ATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGA 57619 |||||||| || || | |||||||| || |||||||||||||| |||||| ||||| Sbjct 99050 ATATCCAGCTAT--GGCAGATGTACAAGAAAGCAGAAGCATCGTTCTGGACCTCGGAAGA 98993 Query 57620 AGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCC--TCAAAGAATCT-GAGAGAAA 57676 | ||||| || | ||||| ||| ||| | | | ||| ||| ||| | | Sbjct 98992 GATTGACCTCACTCATGATCTTGTCGACTGGAACGAGCGATTAAACAATGACGAGCGTCA 98933 Query 57677 TTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTT 57736 ||| || | || || | || || || ||||| || || ||||| || ||||| ||| | Sbjct 98932 TTTCATCACCCATGTCCTTGCATTCTTTGCCGCCTCTGACGGTATCGTGAACGAAAATCT 98873 Query 57737 GGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCA 57796 | | || | |||||| | |||||||||| | |||||| | | |||||| || || || Sbjct 98872 GTTGGAGCGCTTTTCAAACGAAGTGCAAGCAGCTGAGGCGCGCTACTTTTATGGGTTCCA 98813 Query 57797 AGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAA 57856 | | || |||||||| ||||| |||| || || || || |||||||| ||||| || Sbjct 98812 AATAATGATGGAAAACGTTCATTCTGAAACTTACTCTCTGCTTATCGATACATACGTCAA 98753 Query 57857 GGAC----AACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCG 57912 ||| | | ||| | | || || ||| |||| || |||||||| || ||| Sbjct 98752 GGATCTTAATCAACGCGCA---TAT-CTCTTCGACGCAATAGAAACAATACCGTGCATC- 98698 Query 57913 CCAAG---AAGGCAGAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTC 57965 ||| || || || ||| | ||||||||||| | || || | | ||| || Sbjct 98697 --AAGCGCAAAGCCGACTGGGCCCTCAAATGGATATCTGACAAACG--AAG--CACTTTT 98644 Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025 || ||||| | | || ||||| || ||||| || || || ||||| || || || Sbjct 98643 GCAGAGAGATTGGTGGCATTCGCTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCT 98584 Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085 | || || ||| | ||||| |||||||||||||| ||||| || | | |||||| | Sbjct 98583 TCCATTTTCTGGTTAAAGAAGCGCGGCCTGATGCCTGGCCTAACTTATTCAAACGAGCTC 98524 Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC 58145 || || || || ||| | ||||| ||||| ||||| || | ||| | | ||| Sbjct 98523 ATCAGCCGAGATGAAGGTTTACATACCGATTTCGCGTGTCTCCT-TAC-CACCCAT---- 98470 Query 58146 AATAAACCGACGCG-------GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGAT 58198 |||| || |||| || | |||| | | |||||||| || ||||| || || Sbjct 98469 -CTAAAGCGCCGCGCCCAACCGGGTATCATCAAGAAAATTATCACGGAAGCGGTTGCTAT 98411 Query 58199 CGAAAATGAGTTT 58211 |||| | || ||| Sbjct 98410 CGAACAAGATTTT 98398 >seq2933 Length=244213 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || |||||||| ||||| || | || ||||| |||| Sbjct 207832 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACGATTACTCTGGAGGTTGAGTCGTCG 207891 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || || || ||||||||| ||| | ||||| |||||| Sbjct 207892 GACACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCTGACCAG 207951 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || |||||||| |||||||| || | || | |||||| ||| Sbjct 207952 CAGCGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCCGATTACAAC 208011 Query 31373 ATTCAAAAAGAATCGACTCTTCATCT 31398 || || || || ||||||||||| || Sbjct 208012 ATCCAGAAGGAGTCGACTCTTCACCT 208037 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || || || |||||||| | || || || |||| Sbjct 207603 CATGCAGATCTTCGTCAAGACACTCACGGGAAAGACGATCACTCTTGAGGTCGAGTCGTC 207662 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | ||||| || ||| |||||||||||| | ||||| ||||| Sbjct 207663 TGACACTATTGACAATGTCAAGGCGAAAATCCAGGACAAGGAAGGTATTCCGCCTGACCA 207722 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || || |||||||| |||||||| || | || | ||||| || Sbjct 207723 ACAACGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACGCTTTCTGATTACAA 207782 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| || || || || || || ||| | || | || |||| Sbjct 207783 TATTCAGAAAGAGTCAACCCTCCACCTTGTCCTTCGTCTTCGAGGAGGTA 207832 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| || || |||||||||||||| | || || || | || Sbjct 207375 CATGCAAATCTTTGTTAAGACCCTCACGGGCAAAACGATCACTTTGGAGGTCGAGTCTTC 207434 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | ||| ||| ||||| ||| | || ||||| || Sbjct 207435 AGACACGATCGACAACGTGAAGGCCAAGATACAGGATAAGGAGGGCATTCCTCCCGATCA 207494 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 || || ||||| ||||||||||| ||| | ||||| | | | || | || || | Sbjct 207495 ACAACGACTAATCTTCGCTGGCAAGCAGCTCGAAGA-TGGACGCACCCTTTCTGACTACA 207553 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||||| || || || || ||||| || || ||| Sbjct 207554 ACATTCAGAAGGAGTCAACCCTTCACCTTGTTCTT 207588 >seq886 Length=61200 Score = 120 bits (132), Expect = 3e-22 Identities = 295/441 (67%), Gaps = 20/441 (5%) Strand=Plus/Plus Query 57696 GCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA 57755 ||||| || ||||| || ||||| ||||||||||||||| | ||||| | || || | Sbjct 12079 GCGTTCTTTGCCGCCTCTGATGGCATTGTTAACGAGAATCTTCTCGAACGCTTCTCGAAC 12138 Query 57756 GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTG 57815 ||||| || || | ||||| | ||||| ||||| || || | || || ||| | Sbjct 12139 GAAGTACAGGTCGCTGAGGCACGTTGCTTCTACGGGTTCCAGATTATGATGGAGAACATT 12198 Query 57816 CATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGT 57875 || || || | || || || |||||||| || ||| | || ||| | ||| |||| Sbjct 12199 CACTCTGAGACTTACTCTCTTCTCATCGACACATACATCAAAGACCCTGTCGA---ACGT 12255 Query 57876 AGA----CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTG 57928 || || || | || ||||| || || || ||| ||| ||||| ||||| Sbjct 12256 -GATTTCCTTTTTGATGCTATCGAGACCATTCCTTGCATC---AAGCGCAAGGCCGAGTG 12311 Query 57929 GTCAATCAAATGGATAAA--AAGCGC-CACGGCCACGTTCGCCGAGAGGCTAATCGCGTT 57985 | | | ||||| | | | || | ||| |||| |||| | || | || || Sbjct 12312 GGCTCTGCGCTGGATCAGTGATGAGCACTCGGTT---TTCGGCGAGCGTCTCGTAGCCTT 12368 Query 57986 CGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAA 58045 || || || ||||| || ||||| || ||| ||| ||| | || |||||||||||||| Sbjct 12369 TGCTGCTGTTGAAGGCATTTTCTTCTCTGGCTCCTTCGCGTCCATCTTTTGGATGAAGAA 12428 Query 58046 ACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCT 58105 || || | ||||| ||| || |||| |||||| | || || || |||||| | Sbjct 12429 GCGTGGATTAATGCCTGGCTTGGCGTTCTCAAACGAGCTCATCAGTCGTGATGAGGGTAT 12488 Query 58106 CCATACTGATTTTGCGTGCCT 58126 ||||| || || || ||||| Sbjct 12489 GCATACCGACTTCGCCTGCCT 12509 >seq777 Length=200876 Score = 111 bits (122), Expect = 1e-19 Identities = 216/314 (69%), Gaps = 4/314 (1%) Strand=Plus/Minus Query 23624 CCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCC 23683 |||||||| ||| | ||||| |||| || || | |||||| || |||||||| || Sbjct 114955 CCTATGCCACCGGCTGATTTGCTGATCAAAGCACAGTTTTTCAGGGTATCGTAGATACCT 114896 Query 23684 TCGATGCTGTCCTCTTTGGTCGCGACCAAGAAA-CACGAAGACATTTGCGCTTTGGGCGT 23742 ||||| || ||||| | || | |||| || || || |||||||| | || || Sbjct 114895 TCGATAGAATCATCTTTCAT-GCAAACAAGGAAGCATGAGGACATTTGAGGCGAAGGGGT 114837 Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTA 23802 | |||| ||| || || || |||| || || || |||| | ||||| || ||||| Sbjct 114836 ACCGGCATTGAAGAGAGTGGGAGTGGCATGAGTGAAATATCGCTCGGACATGAGGTTGTA 114777 Query 23803 CGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862 || | | | | || || || ||||||||||| || | ||||| ||||| ||||| Sbjct 114776 TGTTTGCAAGACATGCTCGATATCGTCTCCGTGTATCCCAACAGCGACCCGCATGATCAT 114717 Query 23863 GTATTGAGGTCTCTCGACCGTGACG-CCGTTAATTTTGAACAGATATGAACGTTGCATCG 23921 | ||| || | ||| | | ||| ||||||| | || ||||| |||| || | Sbjct 114716 ATGTTGTGGCCGCTC-AGCAATACGACCGTTAAGGCGAATGAGGTATGACCGTTCCAAGG 114658 Query 23922 TTTTAAATCCAAAA 23935 |||||||||||||| Sbjct 114657 TTTTAAATCCAAAA 114644 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || |||||||| ||||||||||| ||||| | || ||||||||||| ||||||||||| Sbjct 115281 AAGAGATCCGGAATCCATAGAGCATAGAATAAATCACGGGCGCGCACTTCCTCTTTGCCA 115222 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 ||||| ||||||| | | | || | || |||||||| || ||||| || | Sbjct 115221 TGATTCTTCCTCAAATCGATCATCGCGAAGATATCAGCATGCCAAGGTTCGAGATAGATA 115162 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 || || || || || | ||| || || || || ||||| || || || || |||||| Sbjct 115161 GCGAAAGCCCCAGGACGCTTGTTACCACCTTGGTCGACATATCGTGCAGTAGCATTGTAC 115102 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGA 23565 | | ||||| ||||| | ||| || || Sbjct 115101 GCCCGAAGCATTGGCACAATACCATTCGA 115073 >seq1379 Length=51093 Score = 107 bits (118), Expect = 2e-18 Identities = 188/274 (69%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 23600 GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCAT 23659 || |||||||| || | | || || ||||| ||| ||| ||| |||| ||||| Sbjct 1611 GCCCGAACGTTATGTATGCTGAGCCCAATGCCACCGGCCGCTTTACTGATCAAAGCGCAG 1552 Query 23660 TGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACAC 23719 | ||||| ||||||||||| || || || |||||||| | ||||| ||||| Sbjct 1551 TTCTTCAGGGTGTCGTAGATACCTTCTATCGAATCCTCTTTCATACAAACCAAAAAACAA 1492 Query 23720 GAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAG 23779 || |||||||| ||| || ||| | || ||| || || || | ||||| || ||| Sbjct 1491 GAGGACATTTGAGCTGAAGGTGTACCCGCATTGAAAAGGGTTGGAGTAGCGTGAGTGAAG 1432 Query 23780 TATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATA 23839 || | | ||||| |||| ||||| | | | | || | || || ||||||||| Sbjct 1431 TAACGCCTGGACATAAGATCATACGTCTGCAAGATGCGCTCGACATCATCGCCGTGTATA 1372 Query 23840 CCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873 || | ||||| ||||| ||||| | ||| |||| Sbjct 1371 CCAACCGCGACACGCATAATCATATGTTGTGGTC 1338 >seq2786 Length=9315 Score = 102 bits (112), Expect = 7e-17 Identities = 147/207 (71%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || ||||| || |||| || | || ||||| ||| Sbjct 1736 CATGCAGATCTTCGTCAAGACCCTCACAGGAAAGGCGATTACTCTGGAGGTTGAGTTGTC 1677 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || || ||| ||||||||| || | ||||| ||||| Sbjct 1676 GGACACCATTGACAATGTAAAGGCGAAAATCCAGGACAAGGAGGGTATCCCGCCTGACCA 1617 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || |||||||| |||||||| || | || | |||||| || Sbjct 1616 GCAGCGTCTCATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGCAC---GCCCGATTACAA 1560 Query 31372 CATTCAAAAAGAATCGACTCTTCATCT 31398 ||||| || || |||||||||| || Sbjct 1559 TATTCAGAAGGAGCCGACTCTTCACCT 1533 >seq1 Length=474241 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| || || |||||||| | || || || | || Sbjct 254370 ATGCAGATCTTTGTGAAGACATTGACCGGAAAGACGATCACTCTTGAGGTCGAGTCTTCT 254429 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | ||||| || ||| | |||||| |||||| | || |||||||| Sbjct 254430 GACACTATCGACAATGTCAAGGCAAAGATTCA-GGACAAAGAAGGCATTCCTCCCGACCA 254488 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || || ||||| || |||||||| || | || | || ||||| Sbjct 254489 ACAGCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACGCTTTCTGACTATAA 254548 Query 31372 CATTCAAAAAGAATCGACTCTTCATCT 31398 |||||| ||||| || || |||||||| Sbjct 254549 CATTCAGAAAGAGTCTACCCTTCATCT 254575 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| || || || |||||| | || || || |||| Sbjct 254142 ATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATCACCTTGGAGGTGGAGTCGTCT 254201 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || || || ||| | ||| ||||| || | || || ||||| Sbjct 254202 GATACCATTGACAATGTGAAGGCAAAGATTCA-GGATAAGGAGGGTATCCCTCCTGACCA 254260 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || || ||||| || ||| | ||||| ||| | |||||||| Sbjct 254261 ACAACGTCTTATCTTTGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTTTCGGATTATAA 254320 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||||||||||||||||||||| || || Sbjct 254321 TATCCAAAAAGAATCGACTCTTCATCTTGTTCT 254353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445749444160560