Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1379 86.0 9e-12 >seq1379 Length=51093 Score = 86.0 bits (94), Expect = 9e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATAAA 96890 || || ||||| | | || ||||| | |||| |||||||| || || ||||||||| Sbjct 1716 GTTCCGATGCTTCAAGTTTATAATGCTACGTCAAGATACGTTGATCAAGGAGGCAATAAA 1775 Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950 || || || ||| ||||| ||||| | ||||| ||||| || ||| | || | | ||| Sbjct 1776 CGTCCCGGAGCTTTAGCCATCTACGTTGAACCGTGGCATGCAGACATCTTCGCGATCATC 1835 Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010 |||||||| | || ||||| ||| | | ||||| ||||| || || Sbjct 1836 AGCTTGCGCAAAGTCCACGGGAAGGAAGAACTGCGAACACGCGACTTATTTTACGCTCTA 1895 Query 97011 TGGGTGCCAGATTTGTT 97027 ||| | ||||||||||| Sbjct 1896 TGGATTCCAGATTTGTT 1912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741031011960680