Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq2933 84.2 1e-11 >seq2933 Length=244213 Score = 84.2 bits (92), Expect = 1e-11 Identities = 140/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232 || |||||||| || |||||||||||||| | || | || ||||| ||||| ||| Sbjct 207800 GTTGACTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCCTCCAACTGCTTGCCA 207741 Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCGCCTGT 33289 ||| || | |||||| ||||| | || || ||||| || || | | ||||| Sbjct 207740 GCAAAAATGAGACGTTGTTGGTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCC--- 207684 Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349 || || | | ||| ||||| | | || || ||||| ||||| |||||||| || Sbjct 207683 TTGACATTGTCAATAGTGTCAGACGACTCGACCTCAAGAGTGATCGTCTTTCCCGTGAGT 207624 Query 33350 GTTTTTACGAAAATTTGCATG 33370 || || ||||| || |||||| Sbjct 207623 GTCTTGACGAAGATCTGCATG 207603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318765777634614