Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq2440 168 6e-37 seq2556 140 3e-28 seq1520 114 1e-20 >seq2440 Length=22844 Score = 168 bits (186), Expect = 6e-37 Identities = 375/558 (67%), Gaps = 5/558 (1%) Strand=Plus/Minus Query 13141 AAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGA 13200 ||||| | ||| || || || ||||| ||| ||||| | ||| || || || ||||| Sbjct 14540 AAACAGTAAACAGGCGAAGTCGGTGTGCATTCCCTCATCACGACTGATGAGTTCATTTGA 14481 Query 13201 AAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACC 13260 ||| | ||||| ||||||||||| | ||| || | ||| || || || ||||| |||| Sbjct 14480 AAACGAAAGACCAGGCATAAGCCCCCTTTTCTTCAACCAGAAGATTGCGGCAAATGAACT 14421 Query 13261 CGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATT 13320 || ||||| | ||| ||||| |||||||| || | | || ||| || ||||| ||| Sbjct 14420 AGAGAAAAAGAGTCCCTCAACAGCTGCAAATGCGACGAGCCGTTCCGCAAACGTATGATT 14361 Query 13321 TTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTT-TTGTTTAACGCAGTTCATATTTT 13379 || ||||| || ||||| ||||||| ||| | | || || ||| Sbjct 14360 GGCCGAATCGATCCATTTCAAAGCCCATGTTGCTTTATTGGCAATAGAAG-GGATGGTTT 14302 Query 13380 CTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATA 13439 | || ||| |||||| | |||| || | ||| |||||| || | || | | Sbjct 14301 CGATGGCGGAAAATAAGTGGTTTTGTTGTTCGGTGTTGGGAATATAGGTTTGGATAAGCA 14242 Query 13440 AGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAG 13499 | |||||| || |||||||||||||||||| ||||| || || || ||||| | || Sbjct 14241 AAGAATACATCTCCGAATGAATATTTTCCATCATGATTTGAAAGCCGTAGAAACAACGAG 14182 Query 13500 CCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGT 13559 | || | | | ||| |||||| ||||| | | |||||||||| || || || |||| Sbjct 14181 CTTCAGGAAGTTTAACCTCGGAGCAAAATTGCTGTACTAAGTTTTCATTGACAATACCGT 14122 Query 13560 CACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGT--TTTCTGACAA 13617 | |||||||| || |||| | | || || | ||| | || ||| | Sbjct 14121 CCGCCGCAGCAAAGAACGCAATAACACGACAAACGAAGTGACGTTCATCATTATTGAGAG 14062 Query 13618 CTTTA-ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAG 13676 || || ||| || ||||| || | ||| || || || || ||||||||||| | Sbjct 14061 CTGTATTCCAGTCCTTGTTGTCTTTGGAGAGATCCACTTCTTCCACTGTCCAAAAAGATG 14002 Query 13677 CAACAGCCTTCTTATACA 13694 | |||||||| || |||| Sbjct 14001 CCACAGCCTTTTTGTACA 13984 >seq2556 Length=115598 Score = 140 bits (154), Expect = 3e-28 Identities = 293/436 (67%), Gaps = 8/436 (2%) Strand=Plus/Plus Query 13150 ACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAG 13209 ||| || ||||| || || |||||||||| || || |||||||||||| | ||||| Sbjct 98485 ACACGCGAAATCGGTATGTAAACCTTCATCTCGGCTGATGAGCTCGTTTGAATAAGTTAG 98544 Query 13210 ACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaa 13269 || ||||| || || || || || | ||| || || | ||| ||||| || |||||||| Sbjct 98545 GCCAGGCATCAGGCCGCGCTTCTTTAACCAGAAAATGGAAGCGAACGACCCAGAAAAAAA 98604 Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTC 13329 ||||| || || || || || || | ||| || || || | || || ||| Sbjct 98605 GATTCCCTCGACAGCAGCGAATGCCACCAATCTCTCTGCAAAAGTGCTTCGTTTGTCAGA 98664 Query 13330 TATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTT 13389 |||||| || |||||||| ||||| | || | ||| || |||||||||||| Sbjct 98665 TATCCATTTGAGGGCCCAGTCGGCTTTGCGCTTGATGCACGGTATTGTTTCTATTGCGTC 98724 Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGC----TAT 13445 || | ||| || ||| || | | |||| |||| |||||| | Sbjct 98725 GAAGAGATATGCGCGTTGATTAAGATC----CTTGACGTATGTATCGATAAGCAGAGAGT 98780 Query 13446 ACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTG 13505 | |||| ||||||| ||||||||| ||||||||| |||||||| | | ||||| | Sbjct 98781 AAGTTTCAGAATGAACGTTTTCCATCATTATTTGGAACCCATAAAAGTAGCGCGCCTCAG 98840 Query 13506 ATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAG 13565 | | || |||||| |||| | || | |||||||| || || |||||| | Sbjct 98841 CTGCTTGCACTTCGTTTGAAAAGCGCTCCAACAGATTTTCGTTCACGATACCGTCAGAGG 98900 Query 13566 CAGCaaaaaaaGCAAG 13581 | ||||| || ||||| Sbjct 98901 CGGCAAAGAATGCAAG 98916 >seq1520 Length=48961 Score = 114 bits (126), Expect = 1e-20 Identities = 294/436 (67%), Gaps = 10/436 (2%) Strand=Plus/Plus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 |||||||| || ||||| ||||||||| | || || || ||||||||||| || | Sbjct 6190 CATGCAAAGTCGGTGTGCATTCCTTCATCACGGCTGATAAGTTCGTTTGAAAAGGTCAAC 6249 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCA-GCAAACGAACCCGaaaaaaa 13269 || |||| | || |||||||| ||||||||||| ||| || || || || || ||||| Sbjct 6250 CCAGGCAATAATCCACGTTTTTTGATCCAAAATAT-GCACGCGAAAGATCCGGAGAAAAA 6308 Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGT-ACTATTTTTACTCT 13328 |||||||| | |||| || || | | | ||| || |||| ||| | || | Sbjct 6309 AATTCCTTCGATGGCTGAGAATGCAACGAGTCGTTCCGCAAACGTAACTTGATCGTCT-T 6367 Query 13329 CTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGT 13388 | ||||| || ||||| ||||||||||||| ||| || |||| || | Sbjct 6368 CGATCCATCTTAGTGCCCATGCCGCTTTTTGTTTAATGCAAGGAATCGTTTCGATAGAAC 6427 Query 13389 TAAATAAATAAtttttttCCTTACTG-TCTAAAATATAAGTATCTATCAATAAGCTATAC 13447 | || || ||| | | | | | ||| ||||| || | |||| || || Sbjct 6428 TGAA-CAAGAATGATCGTTCGAAGGGATCTTGGATATACGTTTGAATCAGCAAAGAGTAA 6486 Query 13448 ATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGAT 13507 |||||||||| || ||||||||| | ||||| ||||| || ||| |||||| | Sbjct 6487 GTTTCTGAATGGATGTTTTCCATCATTGACTGGAATCCATAGAAGGATCGAGCCTCAGCG 6546 Query 13508 ACCTGAACTTCGGAGTA-AAATCTTTCTGCT-AAGTTTTCGTTAACTATCCCGTCACTAG 13565 ||||||| ||| | || | | | | | | ||||||||||| || || ||||| | Sbjct 6547 ACCTGAATTTC--ACTAGAGAAGTGACGGATCAAGTTTTCGTTTACAATACCGTCGGACG 6604 Query 13566 CAGCaaaaaaaGCAAG 13581 |||| ||||| || || Sbjct 6605 CAGCGAAAAATGCTAG 6620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430966416344286