Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 150 4e-31 seq2440 143 6e-29 seq2933 122 2e-22 seq2556 93.3 1e-13 seq2786 91.5 3e-13 seq1017 84.2 5e-11 >seq1 Length=474241 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || |||||||| || |||||||| || || ||||| | || ||| Sbjct 254353 AGAACAAGATGAAGAGTCGATTCTTTTTGGATATTATAATCCGAAAGAGTGCGGCCATCT 254294 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 ||||| || ||||||||||| || || | ||||| |||||||| || || || |||||| Sbjct 254293 TCTAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGGATACCCTCCTTATCC 254234 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||||||||| || ||||| || | |||||| | || ||||| | || || ||| Sbjct 254233 TGAATCTTTGCCTTCACATTGTCAATGGTATCAGACGACTCCACCTCCAAGGTGATGGTC 254174 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || | || || ||||| ||||||||| Sbjct 254173 TTTCCGGTCAAAGTCTTGACAAAGATCTGCATT 254141 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | ||||| ||||||||||| ||||||||||| || || | ||| || || | Sbjct 254575 AGATGAAGGGTAGACTCTTTCTGAATGTTATAGTCAGAAAGCGTACGACCATCCTCCAAC 254516 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || ||||||||||| || | | |||||| || ||||| || |||||||| ||||||||| Sbjct 254515 TGCTTTCCAGCAAAGATCAAACGCTGTTGGTCGGGAGGAATGCCTTCTTTGTCCTGAATC 254456 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 ||||| || ||||| || | || || || || ||||| || || || ||||| || Sbjct 254455 TTTGCCTTGACATTGTCGATAGTGTCAGAAGACTCGACCTCAAGAGTGATCGTCTTTCCG 254396 Query 104534 GTAAGTGTTTTTACAAATATCTGCAT 104559 || | ||| || ||||| |||||||| Sbjct 254395 GTCAATGTCTTCACAAAGATCTGCAT 254370 Score = 100 bits (110), Expect = 7e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | ||| || ||||| | |||||||| |||||||| || |||||| Sbjct 254143 ATTCCACCACGAAGACGAAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTTGTAGTCA 254084 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | ||| || || ||||| ||||| ||||| || | | ||||||||||||| Sbjct 254083 GAAAGAGTGCGACCATCCTCGAGTTGCTTTCCGGCAAAGATCAATCGCTGTTGATCAGGA 254024 Query 104450 GGTAT 104454 || || Sbjct 254023 GGAAT 254019 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 ||||| || || || ||||| ||||| ||||| || | || || || ||| ||||| Sbjct 253956 CCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACCTCA 253897 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||||||||| |||||||| ||||| || ||||| ||||| Sbjct 253896 AGGGTAATAGTCTTCCCAGTAAGAGTTTTGACGAATATTTGCAT 253853 >seq2440 Length=22844 Score = 143 bits (158), Expect = 6e-29 Identities = 374/563 (66%), Gaps = 18/563 (3%) Strand=Plus/Plus Query 268743 TGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACT 268802 |||||||| |||| || || ||||||||||| || |||||||| ||||| || | ||| Sbjct 13984 TGTACAAAAAGGCTGTGGCATCTTTTTGGACAGTGGAAGAAGTGGATCTCTCCAAAGACA 14043 Query 268803 TAATAGATTGGAAAAA---TTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTG 268859 | || ||||| | | | || || ||| | || | | | | || ||| Sbjct 14044 ACAAGGACTGGAATACAGCTCTCAATAATGATGAACGTCACTTCGTTTGTCGTGTTATTG 14103 Query 268860 CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAG 268919 |||| ||||| | || ||||| || || ||||| ||||| || | || || | Sbjct 14104 CGTTCTTTGCTGCGGCGGACGGTATTGTCAATGAAAACTTAGTACAGCAATTTTGCTCCG 14163 Query 268920 AGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTC 268979 |||| | |||||||||| | ||||| ||||| || || || || |||||||||| Sbjct 14164 AGGTTAAACTTCCTGAAGCTCGTTGTTTCTACGGCTTTCAAATCATGATGGAAAATATTC 14223 Query 268980 ATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAA-AAGAAA 269038 |||| |||||||| | | | || | || ||||| | |||| |||| || ||| Sbjct 14224 ATTCGGAGATGTATTCTTTGCTTATCCAAACCTATAT---TCCCAACACCGAACAACAAA 14280 Query 269039 AG-ACT-ATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTC 269096 | ||| |||||| | || ||| || | | | || ||| | ||||||| Sbjct 14281 ACCACTTATTTTCCGCCATCGAAACCATCCCTTCTATTGCCAATAAAGCAACATGGGCTT 14340 Query 269097 TGAAATGGATAAACGATAGCGCGCCT--TACGGA----GAAAGGTTAGTTGCTTTTGCCG 269150 |||||||||| |||| || | |||| ||| || | || || ||||| | Sbjct 14341 TGAAATGGAT---CGATTCGGCCAATCATACGTTTGCGGAACGGCTCGTCGCATTTGCAG 14397 Query 269151 CTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAG 269210 |||| || || | || || || | || |||||||| ||||| |||||||||||||| | Sbjct 14398 CTGTTGAGGGACTCTTTTTCTCTAGTTCATTTGCCGCAATCTTCTGGTTGAAGAAAAGGG 14457 Query 269211 GCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACT 269270 | |||||||| || | | || || || ||| | || || | || || || | ||| Sbjct 14458 GGCTTATGCCTGGTCTTTCGTTTTCAAATGAACTCATCAGTCGTGATGAGGGAATGCACA 14517 Query 269271 GCGACTTCGCTTGTTTATTATTT 269293 ||||||||| |||||| | ||| Sbjct 14518 CCGACTTCGCCTGTTTACTGTTT 14540 >seq2933 Length=244213 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||| || || || | || || |||||||||||||| || ||| Sbjct 207833 ATACCTCCTCGAAGACGAAGGACAAGGTGGAGGGTTGACTCTTTCTGAATATTGTAATCA 207774 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| || || | || || ||||||||||| || | ||||| ||||| Sbjct 207773 GAAAGCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAAATGAGACGTTGTTGGTCAGGC 207714 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || ||||| || || || || ||||| || | || || | || Sbjct 207713 GGAATACCTTCCTTGTCCTGGATTTTCGCCTTGACATTGTCAATAGTGTCAGACGACTCG 207654 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || || ||||| || || || |||||||| Sbjct 207653 ACCTCAAGAGTGATCGTCTTTCCCGTGAGTGTCTTGACGAAGATCTGCAT 207604 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || || || || || | ||| || || | || || ||| Sbjct 208028 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGCGTGCGACCATCCTCCAACTGCTTGCCA 207969 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || | ||| || ||||| || || || || || ||||| ||||| || ||| Sbjct 207968 GCAAAAATGAGACGCTGCTGGTCAGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTT 207909 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || | || ||||| || ||||| ||||| || || || || Sbjct 207908 ACATTGTCAATGGTGTCCGACGACTCAACCTCCAGAGTAATCGTCTTGCCTGTGAGGGTC 207849 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 207848 TTGACGAAGATCTGCAT 207832 >seq2556 Length=115598 Score = 93.3 bits (102), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 11/211 (5%) Strand=Plus/Minus Query 269081 aaaTCTGAATGGGCTCTGAAATGGATA-------AACGATAGCGCGCCTTACGGAGAAAG 269133 ||| | || ||||| || ||||||||| ||||| ||| | || | ||| || Sbjct 98691 AAAGCCGACTGGGCCCTCAAATGGATATCTGACAAACGA-AGCAC---TTTTGCAGAGAG 98636 Query 269134 GTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTT 269193 || || || || || ||||| || || || || ||||| ||||| || || | || || Sbjct 98635 ATTGGTGGCATTCGCTGCTGTCGAGGGAATCTTTTTTTCTGGGTCGTTCGCTTCCATTTT 98576 Query 269194 TTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAG 269253 ||||| ||||| | ||||| ||||| || |||||| || ||||| | || ||| | Sbjct 98575 CTGGTTAAAGAAGCGCGGCCTGATGCCTGGCCTAACTTATTCAAACGAGCTCATCAGCCG 98516 Query 269254 GGACGAAGGTTTACACTGCGACTTCGCTTGT 269284 || ||||||||||| ||| ||||| ||| Sbjct 98515 AGATGAAGGTTTACATACCGATTTCGCGTGT 98485 >seq2786 Length=9315 Score = 91.5 bits (100), Expect = 3e-13 Identities = 135/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||||||||| || || | | || | ||| || || | || || ||||||||| Sbjct 1548 TCCTTCTGAATATTGTAATCGG---GCGTGCGACCATCCTCCAACTGCTTGCCAGCAAAA 1604 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || ||||| || || || || || ||||| || || || |||||||| Sbjct 1605 ATGAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATTTTCGCCTTTACATTG 1664 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| || || ||||| || ||||| | ||| || || || || || || Sbjct 1665 TCAATGGTGTCCGACAACTCAACCTCCAGAGTAATCGCCTTTCCTGTGAGGGTCTTGACG 1724 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 1725 AAGATCTGCAT 1735 >seq1017 Length=59083 Score = 84.2 bits (92), Expect = 5e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||||||||| || || ||| ||||| | || || || |||||||||||| Sbjct 44533 GTGGATTCTTTCTGAATGTTGTAATCACTCAGAGTACGTCCATCCTCAAGTTGTTTTCCA 44592 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTC 104456 || ||||| || | |||||||||||| || |||| Sbjct 44593 GCGAAAATGAGTCGCTGTTGATCAGGGGGAATTC 44626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151353508775444