Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1215 95.1 6e-15 seq258 95.1 6e-15 seq2734 89.7 3e-13 seq2527 89.7 3e-13 >seq1215 Length=190718 Score = 95.1 bits (104), Expect = 6e-15 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 || |||||| || ||||| | | |||||||||| ||||||||||||||||||||| Sbjct 105369 ATCAAAAATATAAGTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACG 105428 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| ||||||||||||| | ||||| Sbjct 105429 ACGCTCTAACCAACTGAGCTAGTCGGCCG 105457 >seq258 Length=75896 Score = 95.1 bits (104), Expect = 6e-15 Identities = 77/93 (83%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||| || ||| |||||| ||||| | | |||||||||| |||||||||||||||| Sbjct 2458 AATGAAAAAATAATCAA--TGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTA 2401 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| ||||||||||||| | |||| Sbjct 2400 GCACGACGCTCTAACCAACTGAGCTAGTCGGCC 2368 >seq2734 Length=102727 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| | | |||||||||| |||||||||||||||||||||||||||| || Sbjct 51404 AAAATGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAAC 51463 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||| | |||| Sbjct 51464 CAACTGAGCTAGTCGGCC 51481 >seq2527 Length=17958 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 8363 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 8422 Query 11528 CCG 11530 ||| Sbjct 8423 CCG 8425 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261481502190268