Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinula_20edodes_20[genbank_20GCA_5F002000105.1_202017-02-13] 3,043 sequences; 40,928,581 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=474241 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || ||||| || ||||| ||||||| | || | || || Sbjct 254370 ATGCAGATCTTTGTGAAGACATTGACCGGAAAGACGATCACTCTTGAGGTCGAGTCTTCT 254429 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | ||||| ||||||| ||||||||||| || |||||||| ||| Sbjct 254430 GACACTATCGACAATGTCAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCCGACCAA 254489 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | | || || || | || |||| | | | | ||||||||| Sbjct 254490 CAGCGTTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACGCTTTCTGACTATAAC 254549 Query 26949 ATTCAAAAAGAATCTACTATCCATCT 26974 ||||| ||||| ||||| | ||||| Sbjct 254550 ATTCAGAAAGAGTCTACCCTTCATCT 254575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478644192878960